Services: proteins and proteomes
Name of service | Tag | Related links* | Key Collection | |
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SWICZ | Database of protein expression time series for specific experiments on streptomyces, caulobacter, neiseria. |
bio.toolsFAIRsharing | ||
SWISS-MODEL Repository | SWISS-MODEL Repository is a continuously updated database of annotated protein structure homology models generated by the fully automated SWISS-MODEL modelling pipeline. |
bio.toolsFAIRsharingTeSS | CDD | |
SWISS-MODEL Server | SWISS-MODEL is a fully automated service for protein structure homology modelling. It provides a personal web based workspace for interactive modelling, storing project data and visualizing results online. |
bio.toolsTeSS | ||
SwissBioPics | SwissBioPics is a freely available library of interactive biological images for visualizing subcellular location data. It includes cell types from all kingdoms of life - from muscle, neuronal and epithelial cells of animals to rods, cocci, clubs, spirals, and other more exotic forms of bacteria and archaea. |
bio.tools | ||
SwissDrugDesign | SwissDrugDesign provides a collection of web-based tools covering all aspects of computer-aided drug design. |
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Tabloid Proteome | Database of protein association networks representing a broad scala of biological associations between pairs of proteins that go beyond direct protein interactions |
bio.tools | ||
TCRex | Web tool for the prediction of T-cell receptor epitope recognition. |
bio.tools | ||
The B6 database | Contains tools for the functional classification of PLP-dependent enzymes in predicted protein sequences. |
bio.tools | ||
TOPP | The OpenMS Proteomics Pipeline making a range of tools available, including MetaProSIP and TOPPview. |
bio.toolsTeSS | ||
TOPPView | Visualising own data through OpenMS tools, including spectra, chromatograms, 2D LC-MS data and annotations. |
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TRAVeLer | Template-based RNA secondary structure visualization. |
bio.tools | ||
Unicarb-DB | The glycomic MS database and repository. |
bio.toolsFAIRsharing | ||
Unilectin | UniLectin is a platform integrating information regarding non-enzymatic carbohydrate-binding proteins usually referred to as lectins with the prospect of building and refining a structural and functional classification of these proteins. It includes the reference Lectin3D a database of 3D structures curated from the PDB. Interactive resource for the exploration of lectins |
bio.tools | ||
Unipept | Platform for metaproteomics data analysis with a focus on interactive data visualizations |
bio.tools | ||
UniProtKB | UniProt produces and maintains automatic and manually curated annotation of all publicly available protein sequences and serves these to users through various interfaces. |
bio.toolsFAIRsharingTeSS | CDD | |
ValidatorDB | Collection of validation results for the entire Protein Data Bank. |
bio.toolsFAIRsharing | ||
VEuPathDB | The Eukaryotic Pathogen, Vector and Host Informatics Resource (VEuPathDB) parasitic species (EuPathDB), fungi (FungiDB) and vector species (VectorBase) |
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ViralZone | A resource for viral genes and families, providing detailed molecular and epidemiological information, along with virion and genome figures. Each virus or family page gives easy access to UniProtKB/Swiss-Prot viral protein entries. |
bio.toolsFAIRsharing |