Services: chemical biology

Name of service Tag Related links* Key Collection
ChEBI

ChEBI (Chemical Entities of Biological Interest) is a dictionary of small molecular entities. It is manually annotated and provides a chemical ontology to describe small molecules, including their biological and chemical roles.

CDD
ChEMBL

ChEMBL is a database of bioactive compounds that focuses on interactions between small molecules and their macromolecular targets, including medicinal chemistry, clinical development and therapeutics data.

CDD
Enzyme Portal

The Enzyme Portal integrates publicly available information from the UniProt Knowledgebase, the Protein Data Bank in Europe, Rhea, Reactome, IntEnz, ChEBI, ChEMBL, Cofactor and MACiE.

IDSM

Integrated Database of Small Molecules.
Aggregating many different sources of information about small molecules into a single, logically coherent and semantically interconnected information source.

IUPHAR/BPS Guide to PHARMACOLOGY

A curated database of drug targets, prescription medicines and experimental drugs.

MeltDB

Analysis of raw GC- and LC-MS metabolome data against the either the GMD database or user defined libraries in NIST.

MetaboLights

MetaboLights is a database for metabolomics experiments and derived information. 

EDD
MetaProSIP

Automated inference of elemental fluxes in microbial communities, now integrated as TOPP into OpenMS

OpenMS

Mass Spec. analysis platform

(See also Topp, LFQProfiler & RNPxl, MetaboProfiler) 

QuPE

Importing and analysing Mass Spec. data in a range of formats and for protein identification.
 

SugarBind

SugarBind covers knowledge of glycan binding of human pathogen lectins and adhesins. Information is collected by experts from articles published in peer-reviewed scientific journals.

SwissLipids

A knowledge resource for lipids and their biology.