%1 services
Name | Description | ELIXIR Node |
---|---|---|
Architecture for Software Containers at ELIXIR and its use by EXCELERATE Use Case Communities
|
The aim of this implementation study is to provide a stable infrastructure for unifying software containers solutions within ELIXIR. This infrastructure will provide an access point for end-users to find, generate, store, monitor, and even benchmark software containers solutions. Hardware infrastructure will be provided by an ELIXIR Node from the ELIXIR Compute Platform for software containers deployment while ELIXIR-ES will provide the backup system using EUDAT protocols and infrastructures. In the long-term this registry could become a relying service to the ELIXIR AAI allowing infrastructures to manage users accounts. The impact of this infrastructure will be demonstrated across ELIXIR Platforms and Use Cases. Software containers are a key technology which enables the rapid deployment of software resources including workflows across a variety of systems e.g. HPC, Cloud environments, and local computers; and the connection with existing database repositories. Additionally, this technology will be used to support training activities carried out by ELIXIR, where trainers will be able to focus on the training content rather than in the technological framework of the training, during face to face or remote sessions. Such a leading role on the development of this infrastructure will greatly increase ELIXIR's visibility across many domains of life sciences and even beyond. The coordinated effort to develop this infrastructure is similar to previous efforts carried out in ELIXIR, such as the Beacon Project and Bioschemas and will also link into work taking place in the ELIXIR Compute and Interoperability Platforms in coordination with the GA4GH. |
EMBL-EBI, ELIXIR Germany, ELIXIR Spain, ELIXIR Belgium , ELIXIR France, ELIXIR Denmark, ELIXIR Italy |
Architecture for Software Containers at ELIXIR and its use by EXCELERATE Use Case Communities
|
The aim of this implementation study is to provide a stable infrastructure for unifying software containers solutions within ELIXIR. This infrastructure will provide an access point for end-users to find, generate, store, monitor, and even benchmark software containers solutions. Hardware infrastructure will be provided by an ELIXIR Node from the ELIXIR Compute Platform for software containers deployment while ELIXIR-ES will provide the backup system using EUDAT protocols and infrastructures. In the long-term this registry could become a relying service to the ELIXIR AAI allowing infrastructures to manage users accounts. The impact of this infrastructure will be demonstrated across ELIXIR Platforms and Use Cases. Software containers are a key technology which enables the rapid deployment of software resources including workflows across a variety of systems e.g. HPC, Cloud environments, and local computers; and the connection with existing database repositories. Additionally, this technology will be used to support training activities carried out by ELIXIR, where trainers will be able to focus on the training content rather than in the technological framework of the training, during face to face or remote sessions. Such a leading role on the development of this infrastructure will greatly increase ELIXIR's visibility across many domains of life sciences and even beyond. The coordinated effort to develop this infrastructure is similar to previous efforts carried out in ELIXIR, such as the Beacon Project and Bioschemas and will also link into work taking place in the ELIXIR Compute and Interoperability Platforms in coordination with the GA4GH. |
EMBL-EBI, ELIXIR Germany, ELIXIR Spain, ELIXIR Belgium , ELIXIR France, ELIXIR Denmark, ELIXIR Italy |
Architecture for Software Containers at ELIXIR and its use by EXCELERATE Use Case Communities
|
The aim of this implementation study is to provide a stable infrastructure for unifying software containers solutions within ELIXIR. This infrastructure will provide an access point for end-users to find, generate, store, monitor, and even benchmark software containers solutions. Hardware infrastructure will be provided by an ELIXIR Node from the ELIXIR Compute Platform for software containers deployment while ELIXIR-ES will provide the backup system using EUDAT protocols and infrastructures. In the long-term this registry could become a relying service to the ELIXIR AAI allowing infrastructures to manage users accounts. The impact of this infrastructure will be demonstrated across ELIXIR Platforms and Use Cases. Software containers are a key technology which enables the rapid deployment of software resources including workflows across a variety of systems e.g. HPC, Cloud environments, and local computers; and the connection with existing database repositories. Additionally, this technology will be used to support training activities carried out by ELIXIR, where trainers will be able to focus on the training content rather than in the technological framework of the training, during face to face or remote sessions. Such a leading role on the development of this infrastructure will greatly increase ELIXIR's visibility across many domains of life sciences and even beyond. The coordinated effort to develop this infrastructure is similar to previous efforts carried out in ELIXIR, such as the Beacon Project and Bioschemas and will also link into work taking place in the ELIXIR Compute and Interoperability Platforms in coordination with the GA4GH. |
EMBL-EBI, ELIXIR Germany, ELIXIR Spain, ELIXIR Belgium , ELIXIR France, ELIXIR Denmark, ELIXIR Italy |
Architecture for Software Containers at ELIXIR and its use by EXCELERATE Use Case Communities
|
The aim of this implementation study is to provide a stable infrastructure for unifying software containers solutions within ELIXIR. This infrastructure will provide an access point for end-users to find, generate, store, monitor, and even benchmark software containers solutions. Hardware infrastructure will be provided by an ELIXIR Node from the ELIXIR Compute Platform for software containers deployment while ELIXIR-ES will provide the backup system using EUDAT protocols and infrastructures. In the long-term this registry could become a relying service to the ELIXIR AAI allowing infrastructures to manage users accounts. The impact of this infrastructure will be demonstrated across ELIXIR Platforms and Use Cases. Software containers are a key technology which enables the rapid deployment of software resources including workflows across a variety of systems e.g. HPC, Cloud environments, and local computers; and the connection with existing database repositories. Additionally, this technology will be used to support training activities carried out by ELIXIR, where trainers will be able to focus on the training content rather than in the technological framework of the training, during face to face or remote sessions. Such a leading role on the development of this infrastructure will greatly increase ELIXIR's visibility across many domains of life sciences and even beyond. The coordinated effort to develop this infrastructure is similar to previous efforts carried out in ELIXIR, such as the Beacon Project and Bioschemas and will also link into work taking place in the ELIXIR Compute and Interoperability Platforms in coordination with the GA4GH. |
EMBL-EBI, ELIXIR Germany, ELIXIR Spain, ELIXIR Belgium , ELIXIR France, ELIXIR Denmark, ELIXIR Italy |
Architecture for Software Containers at ELIXIR and its use by EXCELERATE Use Case Communities
|
The aim of this implementation study is to provide a stable infrastructure for unifying software containers solutions within ELIXIR. This infrastructure will provide an access point for end-users to find, generate, store, monitor, and even benchmark software containers solutions. Hardware infrastructure will be provided by an ELIXIR Node from the ELIXIR Compute Platform for software containers deployment while ELIXIR-ES will provide the backup system using EUDAT protocols and infrastructures. In the long-term this registry could become a relying service to the ELIXIR AAI allowing infrastructures to manage users accounts. The impact of this infrastructure will be demonstrated across ELIXIR Platforms and Use Cases. Software containers are a key technology which enables the rapid deployment of software resources including workflows across a variety of systems e.g. HPC, Cloud environments, and local computers; and the connection with existing database repositories. Additionally, this technology will be used to support training activities carried out by ELIXIR, where trainers will be able to focus on the training content rather than in the technological framework of the training, during face to face or remote sessions. Such a leading role on the development of this infrastructure will greatly increase ELIXIR's visibility across many domains of life sciences and even beyond. The coordinated effort to develop this infrastructure is similar to previous efforts carried out in ELIXIR, such as the Beacon Project and Bioschemas and will also link into work taking place in the ELIXIR Compute and Interoperability Platforms in coordination with the GA4GH. |
EMBL-EBI, ELIXIR Germany, ELIXIR Spain, ELIXIR Belgium , ELIXIR France, ELIXIR Denmark, ELIXIR Italy |
Architecture for Software Containers at ELIXIR and its use by EXCELERATE Use Case Communities
|
The aim of this implementation study is to provide a stable infrastructure for unifying software containers solutions within ELIXIR. This infrastructure will provide an access point for end-users to find, generate, store, monitor, and even benchmark software containers solutions. Hardware infrastructure will be provided by an ELIXIR Node from the ELIXIR Compute Platform for software containers deployment while ELIXIR-ES will provide the backup system using EUDAT protocols and infrastructures. In the long-term this registry could become a relying service to the ELIXIR AAI allowing infrastructures to manage users accounts. The impact of this infrastructure will be demonstrated across ELIXIR Platforms and Use Cases. Software containers are a key technology which enables the rapid deployment of software resources including workflows across a variety of systems e.g. HPC, Cloud environments, and local computers; and the connection with existing database repositories. Additionally, this technology will be used to support training activities carried out by ELIXIR, where trainers will be able to focus on the training content rather than in the technological framework of the training, during face to face or remote sessions. Such a leading role on the development of this infrastructure will greatly increase ELIXIR's visibility across many domains of life sciences and even beyond. The coordinated effort to develop this infrastructure is similar to previous efforts carried out in ELIXIR, such as the Beacon Project and Bioschemas and will also link into work taking place in the ELIXIR Compute and Interoperability Platforms in coordination with the GA4GH. |
EMBL-EBI, ELIXIR Germany, ELIXIR Spain, ELIXIR Belgium , ELIXIR France, ELIXIR Denmark, ELIXIR Italy |
Architecture for Software Containers at ELIXIR and its use by EXCELERATE Use Case Communities
|
The aim of this implementation study is to provide a stable infrastructure for unifying software containers solutions within ELIXIR. This infrastructure will provide an access point for end-users to find, generate, store, monitor, and even benchmark software containers solutions. Hardware infrastructure will be provided by an ELIXIR Node from the ELIXIR Compute Platform for software containers deployment while ELIXIR-ES will provide the backup system using EUDAT protocols and infrastructures. In the long-term this registry could become a relying service to the ELIXIR AAI allowing infrastructures to manage users accounts. The impact of this infrastructure will be demonstrated across ELIXIR Platforms and Use Cases. Software containers are a key technology which enables the rapid deployment of software resources including workflows across a variety of systems e.g. HPC, Cloud environments, and local computers; and the connection with existing database repositories. Additionally, this technology will be used to support training activities carried out by ELIXIR, where trainers will be able to focus on the training content rather than in the technological framework of the training, during face to face or remote sessions. Such a leading role on the development of this infrastructure will greatly increase ELIXIR's visibility across many domains of life sciences and even beyond. The coordinated effort to develop this infrastructure is similar to previous efforts carried out in ELIXIR, such as the Beacon Project and Bioschemas and will also link into work taking place in the ELIXIR Compute and Interoperability Platforms in coordination with the GA4GH. |
EMBL-EBI, ELIXIR Germany, ELIXIR Spain, ELIXIR Belgium , ELIXIR France, ELIXIR Denmark, ELIXIR Italy |
Bridging Academia and Industry with Training
|
How to reach the Life Sciences community beyond Academia, in Industry and in the Job Seeking Market, through training? Inspired by this question, ELIXIR, its German Node and BioNT, put together a bioinformatics training needs survey. Besides providing valuable input for the survey collaborators, the results of the survey directly impacted BioNT’s training. This project builds on the experience of the survey and proposes what could be the next step. BioNT develops and delivers free and openly accessible training workshops that, while still accessible to the academic community, target trainees that are seeking a job in the biotech/biomed sector, as well as employees of the diverse ecosystem of Small and Medium Enterprises (SMEs) in the Life Sciences. The project gathers the expertise of both academia and SME partners, putting together a 12-events program divided into two curricula (4 courses in the basic curriculum delivered twice, 4 courses in the advanced curriculum, for a total of 8 different courses), with offers ranging from introduction to programming and bioinformatics, to system administration and machine learning. The first of BioNT’s workshops, “A practical introduction to bioinformatics and RNA-seq using Galaxy'' will be delivered in early September, providing further insights into the challenges and practical aspects of providing training to SMEs and job seekers. This project will foster the interaction and exchange between ELIXIR, especially the German, Spanish and Norwegian nodes connected to the BioNT project, and the academic and SME partners at BioNT. This would be achieved through a face-to-face meeting hosted by one of BioNT’s SME partners, HPCNow!, in Barcelona. During this meeting, we aim to work on two main goals:
Both documents will be shared within the different communities attending the meeting, potentially reaching the training community worldwide. The event will be open to anyone from the involved ELIXIR nodes. |
ELIXIR Germany, ELIXIR Spain, ELIXIR Norway |
Bridging Academia and Industry with Training
|
How to reach the Life Sciences community beyond Academia, in Industry and in the Job Seeking Market, through training? Inspired by this question, ELIXIR, its German Node and BioNT, put together a bioinformatics training needs survey. Besides providing valuable input for the survey collaborators, the results of the survey directly impacted BioNT’s training. This project builds on the experience of the survey and proposes what could be the next step. BioNT develops and delivers free and openly accessible training workshops that, while still accessible to the academic community, target trainees that are seeking a job in the biotech/biomed sector, as well as employees of the diverse ecosystem of Small and Medium Enterprises (SMEs) in the Life Sciences. The project gathers the expertise of both academia and SME partners, putting together a 12-events program divided into two curricula (4 courses in the basic curriculum delivered twice, 4 courses in the advanced curriculum, for a total of 8 different courses), with offers ranging from introduction to programming and bioinformatics, to system administration and machine learning. The first of BioNT’s workshops, “A practical introduction to bioinformatics and RNA-seq using Galaxy'' will be delivered in early September, providing further insights into the challenges and practical aspects of providing training to SMEs and job seekers. This project will foster the interaction and exchange between ELIXIR, especially the German, Spanish and Norwegian nodes connected to the BioNT project, and the academic and SME partners at BioNT. This would be achieved through a face-to-face meeting hosted by one of BioNT’s SME partners, HPCNow!, in Barcelona. During this meeting, we aim to work on two main goals:
Both documents will be shared within the different communities attending the meeting, potentially reaching the training community worldwide. The event will be open to anyone from the involved ELIXIR nodes. |
ELIXIR Germany, ELIXIR Spain, ELIXIR Norway |
Bridging Academia and Industry with Training
|
How to reach the Life Sciences community beyond Academia, in Industry and in the Job Seeking Market, through training? Inspired by this question, ELIXIR, its German Node and BioNT, put together a bioinformatics training needs survey. Besides providing valuable input for the survey collaborators, the results of the survey directly impacted BioNT’s training. This project builds on the experience of the survey and proposes what could be the next step. BioNT develops and delivers free and openly accessible training workshops that, while still accessible to the academic community, target trainees that are seeking a job in the biotech/biomed sector, as well as employees of the diverse ecosystem of Small and Medium Enterprises (SMEs) in the Life Sciences. The project gathers the expertise of both academia and SME partners, putting together a 12-events program divided into two curricula (4 courses in the basic curriculum delivered twice, 4 courses in the advanced curriculum, for a total of 8 different courses), with offers ranging from introduction to programming and bioinformatics, to system administration and machine learning. The first of BioNT’s workshops, “A practical introduction to bioinformatics and RNA-seq using Galaxy'' will be delivered in early September, providing further insights into the challenges and practical aspects of providing training to SMEs and job seekers. This project will foster the interaction and exchange between ELIXIR, especially the German, Spanish and Norwegian nodes connected to the BioNT project, and the academic and SME partners at BioNT. This would be achieved through a face-to-face meeting hosted by one of BioNT’s SME partners, HPCNow!, in Barcelona. During this meeting, we aim to work on two main goals:
Both documents will be shared within the different communities attending the meeting, potentially reaching the training community worldwide. The event will be open to anyone from the involved ELIXIR nodes. |
ELIXIR Germany, ELIXIR Spain, ELIXIR Norway |
Building a highly skilled and coherent community of trainers through exchanges between ELIXIR Nodes
|
Building on the existing ELIXIR Train-the-Trainer programme, this ELIXIR Staff Exchange project allowed trainers in ELIXIR Nodes to travel to another Node and receive training as part of the ELIXIR Train-the-Trainer programme. Successful participants of the ELIXIR Train-the-Trainer courses were also eligible to apply for travel grants to deliver training in another ELIXIR Node. The project also introduced the term Certified ELIXIR Trainer for an individual who has completed the full ELIXIR Train-the-Trainer course and delivered at least two bioinformatics courses in the twelve months following the completion of the Train-the-Trainer course. |
ELIXIR Belgium , ELIXIR Italy, ELIXIR Norway, ELIXIR Spain, ELIXIR France |
Building a highly skilled and coherent community of trainers through exchanges between ELIXIR Nodes
|
Building on the existing ELIXIR Train-the-Trainer programme, this ELIXIR Staff Exchange project allowed trainers in ELIXIR Nodes to travel to another Node and receive training as part of the ELIXIR Train-the-Trainer programme. Successful participants of the ELIXIR Train-the-Trainer courses were also eligible to apply for travel grants to deliver training in another ELIXIR Node. The project also introduced the term Certified ELIXIR Trainer for an individual who has completed the full ELIXIR Train-the-Trainer course and delivered at least two bioinformatics courses in the twelve months following the completion of the Train-the-Trainer course. |
ELIXIR Belgium , ELIXIR Italy, ELIXIR Norway, ELIXIR Spain, ELIXIR France |
Building a highly skilled and coherent community of trainers through exchanges between ELIXIR Nodes
|
Building on the existing ELIXIR Train-the-Trainer programme, this ELIXIR Staff Exchange project allowed trainers in ELIXIR Nodes to travel to another Node and receive training as part of the ELIXIR Train-the-Trainer programme. Successful participants of the ELIXIR Train-the-Trainer courses were also eligible to apply for travel grants to deliver training in another ELIXIR Node. The project also introduced the term Certified ELIXIR Trainer for an individual who has completed the full ELIXIR Train-the-Trainer course and delivered at least two bioinformatics courses in the twelve months following the completion of the Train-the-Trainer course. |
ELIXIR Belgium , ELIXIR Italy, ELIXIR Norway, ELIXIR Spain, ELIXIR France |
Building a highly skilled and coherent community of trainers through exchanges between ELIXIR Nodes
|
Building on the existing ELIXIR Train-the-Trainer programme, this ELIXIR Staff Exchange project allowed trainers in ELIXIR Nodes to travel to another Node and receive training as part of the ELIXIR Train-the-Trainer programme. Successful participants of the ELIXIR Train-the-Trainer courses were also eligible to apply for travel grants to deliver training in another ELIXIR Node. The project also introduced the term Certified ELIXIR Trainer for an individual who has completed the full ELIXIR Train-the-Trainer course and delivered at least two bioinformatics courses in the twelve months following the completion of the Train-the-Trainer course. |
ELIXIR Belgium , ELIXIR Italy, ELIXIR Norway, ELIXIR Spain, ELIXIR France |
Building a highly skilled and coherent community of trainers through exchanges between ELIXIR Nodes
|
Building on the existing ELIXIR Train-the-Trainer programme, this ELIXIR Staff Exchange project allowed trainers in ELIXIR Nodes to travel to another Node and receive training as part of the ELIXIR Train-the-Trainer programme. Successful participants of the ELIXIR Train-the-Trainer courses were also eligible to apply for travel grants to deliver training in another ELIXIR Node. The project also introduced the term Certified ELIXIR Trainer for an individual who has completed the full ELIXIR Train-the-Trainer course and delivered at least two bioinformatics courses in the twelve months following the completion of the Train-the-Trainer course. |
ELIXIR Belgium , ELIXIR Italy, ELIXIR Norway, ELIXIR Spain, ELIXIR France |
Building the foundation for Data Carpentry and Software Carpentry within ELIXIR
|
There is a lot of material to teach software development, data manipulation, etc., but much of it is scattered, disorganized, contradictory, or inaccessible because it assumes too much prior knowledge. Contrarily there is a lack of training material in biocuration and for the development of content standards (terminologies, minimum information checklists, exchange formats) and their use in e.g. annotation tools. Nevertheless, funders and researchers increasingly call for enhanced, standards driven experimental annotation at the source and data sharing to maximise data reproducibility and reuse, in order to drive science and scientific discoveries. To tackle this evident gap, this ELIXIR project led by ELIXIR-UK with support from other ELIXIR Nodes aims to leverage the work of the existing Software Carpentry initiative and launch the Data Carpentry initiative for ELIXIR, closely working with the existing international Data Carpentery network. The outcomes of the project are published: Developing a strategy for computational lab skills training through Software and Data Carpentry: Experiences from the ELIXIR Pilot action. |
ELIXIR UK, ELIXIR Norway, ELIXIR Finland, ELIXIR Italy, ELIXIR Belgium , ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Czech Republic, ELIXIR France, ELIXIR Israel, ELIXIR Portugal |
Building the foundation for Data Carpentry and Software Carpentry within ELIXIR
|
There is a lot of material to teach software development, data manipulation, etc., but much of it is scattered, disorganized, contradictory, or inaccessible because it assumes too much prior knowledge. Contrarily there is a lack of training material in biocuration and for the development of content standards (terminologies, minimum information checklists, exchange formats) and their use in e.g. annotation tools. Nevertheless, funders and researchers increasingly call for enhanced, standards driven experimental annotation at the source and data sharing to maximise data reproducibility and reuse, in order to drive science and scientific discoveries. To tackle this evident gap, this ELIXIR project led by ELIXIR-UK with support from other ELIXIR Nodes aims to leverage the work of the existing Software Carpentry initiative and launch the Data Carpentry initiative for ELIXIR, closely working with the existing international Data Carpentery network. The outcomes of the project are published: Developing a strategy for computational lab skills training through Software and Data Carpentry: Experiences from the ELIXIR Pilot action. |
ELIXIR UK, ELIXIR Norway, ELIXIR Finland, ELIXIR Italy, ELIXIR Belgium , ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Czech Republic, ELIXIR France, ELIXIR Israel, ELIXIR Portugal |
Building the foundation for Data Carpentry and Software Carpentry within ELIXIR
|
There is a lot of material to teach software development, data manipulation, etc., but much of it is scattered, disorganized, contradictory, or inaccessible because it assumes too much prior knowledge. Contrarily there is a lack of training material in biocuration and for the development of content standards (terminologies, minimum information checklists, exchange formats) and their use in e.g. annotation tools. Nevertheless, funders and researchers increasingly call for enhanced, standards driven experimental annotation at the source and data sharing to maximise data reproducibility and reuse, in order to drive science and scientific discoveries. To tackle this evident gap, this ELIXIR project led by ELIXIR-UK with support from other ELIXIR Nodes aims to leverage the work of the existing Software Carpentry initiative and launch the Data Carpentry initiative for ELIXIR, closely working with the existing international Data Carpentery network. The outcomes of the project are published: Developing a strategy for computational lab skills training through Software and Data Carpentry: Experiences from the ELIXIR Pilot action. |
ELIXIR UK, ELIXIR Norway, ELIXIR Finland, ELIXIR Italy, ELIXIR Belgium , ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Czech Republic, ELIXIR France, ELIXIR Israel, ELIXIR Portugal |
Building the foundation for Data Carpentry and Software Carpentry within ELIXIR
|
There is a lot of material to teach software development, data manipulation, etc., but much of it is scattered, disorganized, contradictory, or inaccessible because it assumes too much prior knowledge. Contrarily there is a lack of training material in biocuration and for the development of content standards (terminologies, minimum information checklists, exchange formats) and their use in e.g. annotation tools. Nevertheless, funders and researchers increasingly call for enhanced, standards driven experimental annotation at the source and data sharing to maximise data reproducibility and reuse, in order to drive science and scientific discoveries. To tackle this evident gap, this ELIXIR project led by ELIXIR-UK with support from other ELIXIR Nodes aims to leverage the work of the existing Software Carpentry initiative and launch the Data Carpentry initiative for ELIXIR, closely working with the existing international Data Carpentery network. The outcomes of the project are published: Developing a strategy for computational lab skills training through Software and Data Carpentry: Experiences from the ELIXIR Pilot action. |
ELIXIR UK, ELIXIR Norway, ELIXIR Finland, ELIXIR Italy, ELIXIR Belgium , ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Czech Republic, ELIXIR France, ELIXIR Israel, ELIXIR Portugal |
Building the foundation for Data Carpentry and Software Carpentry within ELIXIR
|
There is a lot of material to teach software development, data manipulation, etc., but much of it is scattered, disorganized, contradictory, or inaccessible because it assumes too much prior knowledge. Contrarily there is a lack of training material in biocuration and for the development of content standards (terminologies, minimum information checklists, exchange formats) and their use in e.g. annotation tools. Nevertheless, funders and researchers increasingly call for enhanced, standards driven experimental annotation at the source and data sharing to maximise data reproducibility and reuse, in order to drive science and scientific discoveries. To tackle this evident gap, this ELIXIR project led by ELIXIR-UK with support from other ELIXIR Nodes aims to leverage the work of the existing Software Carpentry initiative and launch the Data Carpentry initiative for ELIXIR, closely working with the existing international Data Carpentery network. The outcomes of the project are published: Developing a strategy for computational lab skills training through Software and Data Carpentry: Experiences from the ELIXIR Pilot action. |
ELIXIR UK, ELIXIR Norway, ELIXIR Finland, ELIXIR Italy, ELIXIR Belgium , ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Czech Republic, ELIXIR France, ELIXIR Israel, ELIXIR Portugal |
Building the foundation for Data Carpentry and Software Carpentry within ELIXIR
|
There is a lot of material to teach software development, data manipulation, etc., but much of it is scattered, disorganized, contradictory, or inaccessible because it assumes too much prior knowledge. Contrarily there is a lack of training material in biocuration and for the development of content standards (terminologies, minimum information checklists, exchange formats) and their use in e.g. annotation tools. Nevertheless, funders and researchers increasingly call for enhanced, standards driven experimental annotation at the source and data sharing to maximise data reproducibility and reuse, in order to drive science and scientific discoveries. To tackle this evident gap, this ELIXIR project led by ELIXIR-UK with support from other ELIXIR Nodes aims to leverage the work of the existing Software Carpentry initiative and launch the Data Carpentry initiative for ELIXIR, closely working with the existing international Data Carpentery network. The outcomes of the project are published: Developing a strategy for computational lab skills training through Software and Data Carpentry: Experiences from the ELIXIR Pilot action. |
ELIXIR UK, ELIXIR Norway, ELIXIR Finland, ELIXIR Italy, ELIXIR Belgium , ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Czech Republic, ELIXIR France, ELIXIR Israel, ELIXIR Portugal |
Building the foundation for Data Carpentry and Software Carpentry within ELIXIR
|
There is a lot of material to teach software development, data manipulation, etc., but much of it is scattered, disorganized, contradictory, or inaccessible because it assumes too much prior knowledge. Contrarily there is a lack of training material in biocuration and for the development of content standards (terminologies, minimum information checklists, exchange formats) and their use in e.g. annotation tools. Nevertheless, funders and researchers increasingly call for enhanced, standards driven experimental annotation at the source and data sharing to maximise data reproducibility and reuse, in order to drive science and scientific discoveries. To tackle this evident gap, this ELIXIR project led by ELIXIR-UK with support from other ELIXIR Nodes aims to leverage the work of the existing Software Carpentry initiative and launch the Data Carpentry initiative for ELIXIR, closely working with the existing international Data Carpentery network. The outcomes of the project are published: Developing a strategy for computational lab skills training through Software and Data Carpentry: Experiences from the ELIXIR Pilot action. |
ELIXIR UK, ELIXIR Norway, ELIXIR Finland, ELIXIR Italy, ELIXIR Belgium , ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Czech Republic, ELIXIR France, ELIXIR Israel, ELIXIR Portugal |
Building the foundation for Data Carpentry and Software Carpentry within ELIXIR
|
There is a lot of material to teach software development, data manipulation, etc., but much of it is scattered, disorganized, contradictory, or inaccessible because it assumes too much prior knowledge. Contrarily there is a lack of training material in biocuration and for the development of content standards (terminologies, minimum information checklists, exchange formats) and their use in e.g. annotation tools. Nevertheless, funders and researchers increasingly call for enhanced, standards driven experimental annotation at the source and data sharing to maximise data reproducibility and reuse, in order to drive science and scientific discoveries. To tackle this evident gap, this ELIXIR project led by ELIXIR-UK with support from other ELIXIR Nodes aims to leverage the work of the existing Software Carpentry initiative and launch the Data Carpentry initiative for ELIXIR, closely working with the existing international Data Carpentery network. The outcomes of the project are published: Developing a strategy for computational lab skills training through Software and Data Carpentry: Experiences from the ELIXIR Pilot action. |
ELIXIR UK, ELIXIR Norway, ELIXIR Finland, ELIXIR Italy, ELIXIR Belgium , ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Czech Republic, ELIXIR France, ELIXIR Israel, ELIXIR Portugal |
Building the foundation for Data Carpentry and Software Carpentry within ELIXIR
|
There is a lot of material to teach software development, data manipulation, etc., but much of it is scattered, disorganized, contradictory, or inaccessible because it assumes too much prior knowledge. Contrarily there is a lack of training material in biocuration and for the development of content standards (terminologies, minimum information checklists, exchange formats) and their use in e.g. annotation tools. Nevertheless, funders and researchers increasingly call for enhanced, standards driven experimental annotation at the source and data sharing to maximise data reproducibility and reuse, in order to drive science and scientific discoveries. To tackle this evident gap, this ELIXIR project led by ELIXIR-UK with support from other ELIXIR Nodes aims to leverage the work of the existing Software Carpentry initiative and launch the Data Carpentry initiative for ELIXIR, closely working with the existing international Data Carpentery network. The outcomes of the project are published: Developing a strategy for computational lab skills training through Software and Data Carpentry: Experiences from the ELIXIR Pilot action. |
ELIXIR UK, ELIXIR Norway, ELIXIR Finland, ELIXIR Italy, ELIXIR Belgium , ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Czech Republic, ELIXIR France, ELIXIR Israel, ELIXIR Portugal |
Building the foundation for Data Carpentry and Software Carpentry within ELIXIR
|
There is a lot of material to teach software development, data manipulation, etc., but much of it is scattered, disorganized, contradictory, or inaccessible because it assumes too much prior knowledge. Contrarily there is a lack of training material in biocuration and for the development of content standards (terminologies, minimum information checklists, exchange formats) and their use in e.g. annotation tools. Nevertheless, funders and researchers increasingly call for enhanced, standards driven experimental annotation at the source and data sharing to maximise data reproducibility and reuse, in order to drive science and scientific discoveries. To tackle this evident gap, this ELIXIR project led by ELIXIR-UK with support from other ELIXIR Nodes aims to leverage the work of the existing Software Carpentry initiative and launch the Data Carpentry initiative for ELIXIR, closely working with the existing international Data Carpentery network. The outcomes of the project are published: Developing a strategy for computational lab skills training through Software and Data Carpentry: Experiences from the ELIXIR Pilot action. |
ELIXIR UK, ELIXIR Norway, ELIXIR Finland, ELIXIR Italy, ELIXIR Belgium , ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Czech Republic, ELIXIR France, ELIXIR Israel, ELIXIR Portugal |
Building the foundation for Data Carpentry and Software Carpentry within ELIXIR
|
There is a lot of material to teach software development, data manipulation, etc., but much of it is scattered, disorganized, contradictory, or inaccessible because it assumes too much prior knowledge. Contrarily there is a lack of training material in biocuration and for the development of content standards (terminologies, minimum information checklists, exchange formats) and their use in e.g. annotation tools. Nevertheless, funders and researchers increasingly call for enhanced, standards driven experimental annotation at the source and data sharing to maximise data reproducibility and reuse, in order to drive science and scientific discoveries. To tackle this evident gap, this ELIXIR project led by ELIXIR-UK with support from other ELIXIR Nodes aims to leverage the work of the existing Software Carpentry initiative and launch the Data Carpentry initiative for ELIXIR, closely working with the existing international Data Carpentery network. The outcomes of the project are published: Developing a strategy for computational lab skills training through Software and Data Carpentry: Experiences from the ELIXIR Pilot action. |
ELIXIR UK, ELIXIR Norway, ELIXIR Finland, ELIXIR Italy, ELIXIR Belgium , ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Czech Republic, ELIXIR France, ELIXIR Israel, ELIXIR Portugal |
Building the foundation for Data Carpentry and Software Carpentry within ELIXIR
|
There is a lot of material to teach software development, data manipulation, etc., but much of it is scattered, disorganized, contradictory, or inaccessible because it assumes too much prior knowledge. Contrarily there is a lack of training material in biocuration and for the development of content standards (terminologies, minimum information checklists, exchange formats) and their use in e.g. annotation tools. Nevertheless, funders and researchers increasingly call for enhanced, standards driven experimental annotation at the source and data sharing to maximise data reproducibility and reuse, in order to drive science and scientific discoveries. To tackle this evident gap, this ELIXIR project led by ELIXIR-UK with support from other ELIXIR Nodes aims to leverage the work of the existing Software Carpentry initiative and launch the Data Carpentry initiative for ELIXIR, closely working with the existing international Data Carpentery network. The outcomes of the project are published: Developing a strategy for computational lab skills training through Software and Data Carpentry: Experiences from the ELIXIR Pilot action. |
ELIXIR UK, ELIXIR Norway, ELIXIR Finland, ELIXIR Italy, ELIXIR Belgium , ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Czech Republic, ELIXIR France, ELIXIR Israel, ELIXIR Portugal |
Building the foundation for Data Carpentry and Software Carpentry within ELIXIR
|
There is a lot of material to teach software development, data manipulation, etc., but much of it is scattered, disorganized, contradictory, or inaccessible because it assumes too much prior knowledge. Contrarily there is a lack of training material in biocuration and for the development of content standards (terminologies, minimum information checklists, exchange formats) and their use in e.g. annotation tools. Nevertheless, funders and researchers increasingly call for enhanced, standards driven experimental annotation at the source and data sharing to maximise data reproducibility and reuse, in order to drive science and scientific discoveries. To tackle this evident gap, this ELIXIR project led by ELIXIR-UK with support from other ELIXIR Nodes aims to leverage the work of the existing Software Carpentry initiative and launch the Data Carpentry initiative for ELIXIR, closely working with the existing international Data Carpentery network. The outcomes of the project are published: Developing a strategy for computational lab skills training through Software and Data Carpentry: Experiences from the ELIXIR Pilot action. |
ELIXIR UK, ELIXIR Norway, ELIXIR Finland, ELIXIR Italy, ELIXIR Belgium , ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Czech Republic, ELIXIR France, ELIXIR Israel, ELIXIR Portugal |
Consolidating quality and impact of the TeSS training resources (2022-23)
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The Task 3 has four main objectives:
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ELIXIR Italy, ELIXIR Sweden, ELIXIR UK, ELIXIR Belgium , ELIXIR France, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR Spain, ELIXIR Denmark, ELIXIR Norway |
Consolidating quality and impact of the TeSS training resources (2022-23)
|
The Task 3 has four main objectives:
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ELIXIR Italy, ELIXIR Sweden, ELIXIR UK, ELIXIR Belgium , ELIXIR France, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR Spain, ELIXIR Denmark, ELIXIR Norway |
Consolidating quality and impact of the TeSS training resources (2022-23)
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The Task 3 has four main objectives:
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ELIXIR Italy, ELIXIR Sweden, ELIXIR UK, ELIXIR Belgium , ELIXIR France, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR Spain, ELIXIR Denmark, ELIXIR Norway |
Consolidating quality and impact of the TeSS training resources (2022-23)
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The Task 3 has four main objectives:
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ELIXIR Italy, ELIXIR Sweden, ELIXIR UK, ELIXIR Belgium , ELIXIR France, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR Spain, ELIXIR Denmark, ELIXIR Norway |
Consolidating quality and impact of the TeSS training resources (2022-23)
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The Task 3 has four main objectives:
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ELIXIR Italy, ELIXIR Sweden, ELIXIR UK, ELIXIR Belgium , ELIXIR France, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR Spain, ELIXIR Denmark, ELIXIR Norway |
Consolidating quality and impact of the TeSS training resources (2022-23)
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The Task 3 has four main objectives:
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ELIXIR Italy, ELIXIR Sweden, ELIXIR UK, ELIXIR Belgium , ELIXIR France, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR Spain, ELIXIR Denmark, ELIXIR Norway |
Consolidating quality and impact of the TeSS training resources (2022-23)
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The Task 3 has four main objectives:
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ELIXIR Italy, ELIXIR Sweden, ELIXIR UK, ELIXIR Belgium , ELIXIR France, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR Spain, ELIXIR Denmark, ELIXIR Norway |
Consolidating quality and impact of the TeSS training resources (2022-23)
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The Task 3 has four main objectives:
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ELIXIR Italy, ELIXIR Sweden, ELIXIR UK, ELIXIR Belgium , ELIXIR France, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR Spain, ELIXIR Denmark, ELIXIR Norway |
Consolidating quality and impact of the TeSS training resources (2022-23)
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The Task 3 has four main objectives:
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ELIXIR Italy, ELIXIR Sweden, ELIXIR UK, ELIXIR Belgium , ELIXIR France, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR Spain, ELIXIR Denmark, ELIXIR Norway |
Consolidating quality and impact of the TeSS training resources (2022-23)
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The Task 3 has four main objectives:
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ELIXIR Italy, ELIXIR Sweden, ELIXIR UK, ELIXIR Belgium , ELIXIR France, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR Spain, ELIXIR Denmark, ELIXIR Norway |
Consolidating quality and impact of the TeSS training resources (2022-23)
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The Task 3 has four main objectives:
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ELIXIR Italy, ELIXIR Sweden, ELIXIR UK, ELIXIR Belgium , ELIXIR France, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR Spain, ELIXIR Denmark, ELIXIR Norway |
Consolidating quality and impact of the TeSS training resources (2022-23)
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The Task 3 has four main objectives:
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ELIXIR Italy, ELIXIR Sweden, ELIXIR UK, ELIXIR Belgium , ELIXIR France, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR Spain, ELIXIR Denmark, ELIXIR Norway |
Consolidating quality and impact of the TeSS training resources (2022-23)
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The Task 3 has four main objectives:
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ELIXIR Italy, ELIXIR Sweden, ELIXIR UK, ELIXIR Belgium , ELIXIR France, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR Spain, ELIXIR Denmark, ELIXIR Norway |
Developing learning paths for users of ELIXIR services
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The aim of this Implementation Study is to guide ELIXIR users to identify those competencies they require and the suitable courses to acquire such competencies to be able to carry out their daily work more effectively. The Study will establish three Work Packages (WP) bridging efforts across ELIXR Platforms, key bioinformatics and data-science initiatives, and Industry partners, to meet Industry needs.
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ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR France, ELIXIR Luxembourg, ELIXIR Estonia, ELIXIR Switzerland, ELIXIR Italy, ELIXIR Finland, ELIXIR Belgium |
Developing learning paths for users of ELIXIR services
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The aim of this Implementation Study is to guide ELIXIR users to identify those competencies they require and the suitable courses to acquire such competencies to be able to carry out their daily work more effectively. The Study will establish three Work Packages (WP) bridging efforts across ELIXR Platforms, key bioinformatics and data-science initiatives, and Industry partners, to meet Industry needs.
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ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR France, ELIXIR Luxembourg, ELIXIR Estonia, ELIXIR Switzerland, ELIXIR Italy, ELIXIR Finland, ELIXIR Belgium |
Developing learning paths for users of ELIXIR services
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The aim of this Implementation Study is to guide ELIXIR users to identify those competencies they require and the suitable courses to acquire such competencies to be able to carry out their daily work more effectively. The Study will establish three Work Packages (WP) bridging efforts across ELIXR Platforms, key bioinformatics and data-science initiatives, and Industry partners, to meet Industry needs.
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ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR France, ELIXIR Luxembourg, ELIXIR Estonia, ELIXIR Switzerland, ELIXIR Italy, ELIXIR Finland, ELIXIR Belgium |
Developing learning paths for users of ELIXIR services
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The aim of this Implementation Study is to guide ELIXIR users to identify those competencies they require and the suitable courses to acquire such competencies to be able to carry out their daily work more effectively. The Study will establish three Work Packages (WP) bridging efforts across ELIXR Platforms, key bioinformatics and data-science initiatives, and Industry partners, to meet Industry needs.
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ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR France, ELIXIR Luxembourg, ELIXIR Estonia, ELIXIR Switzerland, ELIXIR Italy, ELIXIR Finland, ELIXIR Belgium |
Developing learning paths for users of ELIXIR services
|
The aim of this Implementation Study is to guide ELIXIR users to identify those competencies they require and the suitable courses to acquire such competencies to be able to carry out their daily work more effectively. The Study will establish three Work Packages (WP) bridging efforts across ELIXR Platforms, key bioinformatics and data-science initiatives, and Industry partners, to meet Industry needs.
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ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR France, ELIXIR Luxembourg, ELIXIR Estonia, ELIXIR Switzerland, ELIXIR Italy, ELIXIR Finland, ELIXIR Belgium |
Developing learning paths for users of ELIXIR services
|
The aim of this Implementation Study is to guide ELIXIR users to identify those competencies they require and the suitable courses to acquire such competencies to be able to carry out their daily work more effectively. The Study will establish three Work Packages (WP) bridging efforts across ELIXR Platforms, key bioinformatics and data-science initiatives, and Industry partners, to meet Industry needs.
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ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR France, ELIXIR Luxembourg, ELIXIR Estonia, ELIXIR Switzerland, ELIXIR Italy, ELIXIR Finland, ELIXIR Belgium |
Developing learning paths for users of ELIXIR services
|
The aim of this Implementation Study is to guide ELIXIR users to identify those competencies they require and the suitable courses to acquire such competencies to be able to carry out their daily work more effectively. The Study will establish three Work Packages (WP) bridging efforts across ELIXR Platforms, key bioinformatics and data-science initiatives, and Industry partners, to meet Industry needs.
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ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR France, ELIXIR Luxembourg, ELIXIR Estonia, ELIXIR Switzerland, ELIXIR Italy, ELIXIR Finland, ELIXIR Belgium |
Developing learning paths for users of ELIXIR services
|
The aim of this Implementation Study is to guide ELIXIR users to identify those competencies they require and the suitable courses to acquire such competencies to be able to carry out their daily work more effectively. The Study will establish three Work Packages (WP) bridging efforts across ELIXR Platforms, key bioinformatics and data-science initiatives, and Industry partners, to meet Industry needs.
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ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR France, ELIXIR Luxembourg, ELIXIR Estonia, ELIXIR Switzerland, ELIXIR Italy, ELIXIR Finland, ELIXIR Belgium |
Developing learning paths for users of ELIXIR services
|
The aim of this Implementation Study is to guide ELIXIR users to identify those competencies they require and the suitable courses to acquire such competencies to be able to carry out their daily work more effectively. The Study will establish three Work Packages (WP) bridging efforts across ELIXR Platforms, key bioinformatics and data-science initiatives, and Industry partners, to meet Industry needs.
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ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR France, ELIXIR Luxembourg, ELIXIR Estonia, ELIXIR Switzerland, ELIXIR Italy, ELIXIR Finland, ELIXIR Belgium |
Developing learning paths for users of ELIXIR services
|
The aim of this Implementation Study is to guide ELIXIR users to identify those competencies they require and the suitable courses to acquire such competencies to be able to carry out their daily work more effectively. The Study will establish three Work Packages (WP) bridging efforts across ELIXR Platforms, key bioinformatics and data-science initiatives, and Industry partners, to meet Industry needs.
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ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR France, ELIXIR Luxembourg, ELIXIR Estonia, ELIXIR Switzerland, ELIXIR Italy, ELIXIR Finland, ELIXIR Belgium |
ELIXIR integration from a user perspective
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ELIXIR is about integration of diverse resources including tools, training materials and technical services. Within EXCELERATE, ELIXIR is building portals to collate information on tools and data services (bio.tools), training events and material (TeSS, WP11 e-learning environment), compute resources (WP4 technical service registry) and cross-linked policy, standards and databases (FAIRsharing, WP4). A focus of EXCELERATE is to set up these portals such that they can interoperate. |
ELIXIR UK, ELIXIR Estonia, ELIXIR Belgium , ELIXIR Denmark, ELIXIR Switzerland, EMBL-EBI, ELIXIR Norway, ELIXIR France |
ELIXIR integration from a user perspective
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ELIXIR is about integration of diverse resources including tools, training materials and technical services. Within EXCELERATE, ELIXIR is building portals to collate information on tools and data services (bio.tools), training events and material (TeSS, WP11 e-learning environment), compute resources (WP4 technical service registry) and cross-linked policy, standards and databases (FAIRsharing, WP4). A focus of EXCELERATE is to set up these portals such that they can interoperate. |
ELIXIR UK, ELIXIR Estonia, ELIXIR Belgium , ELIXIR Denmark, ELIXIR Switzerland, EMBL-EBI, ELIXIR Norway, ELIXIR France |
ELIXIR integration from a user perspective
|
ELIXIR is about integration of diverse resources including tools, training materials and technical services. Within EXCELERATE, ELIXIR is building portals to collate information on tools and data services (bio.tools), training events and material (TeSS, WP11 e-learning environment), compute resources (WP4 technical service registry) and cross-linked policy, standards and databases (FAIRsharing, WP4). A focus of EXCELERATE is to set up these portals such that they can interoperate. |
ELIXIR UK, ELIXIR Estonia, ELIXIR Belgium , ELIXIR Denmark, ELIXIR Switzerland, EMBL-EBI, ELIXIR Norway, ELIXIR France |
ELIXIR integration from a user perspective
|
ELIXIR is about integration of diverse resources including tools, training materials and technical services. Within EXCELERATE, ELIXIR is building portals to collate information on tools and data services (bio.tools), training events and material (TeSS, WP11 e-learning environment), compute resources (WP4 technical service registry) and cross-linked policy, standards and databases (FAIRsharing, WP4). A focus of EXCELERATE is to set up these portals such that they can interoperate. |
ELIXIR UK, ELIXIR Estonia, ELIXIR Belgium , ELIXIR Denmark, ELIXIR Switzerland, EMBL-EBI, ELIXIR Norway, ELIXIR France |
ELIXIR integration from a user perspective
|
ELIXIR is about integration of diverse resources including tools, training materials and technical services. Within EXCELERATE, ELIXIR is building portals to collate information on tools and data services (bio.tools), training events and material (TeSS, WP11 e-learning environment), compute resources (WP4 technical service registry) and cross-linked policy, standards and databases (FAIRsharing, WP4). A focus of EXCELERATE is to set up these portals such that they can interoperate. |
ELIXIR UK, ELIXIR Estonia, ELIXIR Belgium , ELIXIR Denmark, ELIXIR Switzerland, EMBL-EBI, ELIXIR Norway, ELIXIR France |
ELIXIR integration from a user perspective
|
ELIXIR is about integration of diverse resources including tools, training materials and technical services. Within EXCELERATE, ELIXIR is building portals to collate information on tools and data services (bio.tools), training events and material (TeSS, WP11 e-learning environment), compute resources (WP4 technical service registry) and cross-linked policy, standards and databases (FAIRsharing, WP4). A focus of EXCELERATE is to set up these portals such that they can interoperate. |
ELIXIR UK, ELIXIR Estonia, ELIXIR Belgium , ELIXIR Denmark, ELIXIR Switzerland, EMBL-EBI, ELIXIR Norway, ELIXIR France |
ELIXIR integration from a user perspective
|
ELIXIR is about integration of diverse resources including tools, training materials and technical services. Within EXCELERATE, ELIXIR is building portals to collate information on tools and data services (bio.tools), training events and material (TeSS, WP11 e-learning environment), compute resources (WP4 technical service registry) and cross-linked policy, standards and databases (FAIRsharing, WP4). A focus of EXCELERATE is to set up these portals such that they can interoperate. |
ELIXIR UK, ELIXIR Estonia, ELIXIR Belgium , ELIXIR Denmark, ELIXIR Switzerland, EMBL-EBI, ELIXIR Norway, ELIXIR France |
ELIXIR integration from a user perspective
|
ELIXIR is about integration of diverse resources including tools, training materials and technical services. Within EXCELERATE, ELIXIR is building portals to collate information on tools and data services (bio.tools), training events and material (TeSS, WP11 e-learning environment), compute resources (WP4 technical service registry) and cross-linked policy, standards and databases (FAIRsharing, WP4). A focus of EXCELERATE is to set up these portals such that they can interoperate. |
ELIXIR UK, ELIXIR Estonia, ELIXIR Belgium , ELIXIR Denmark, ELIXIR Switzerland, EMBL-EBI, ELIXIR Norway, ELIXIR France |
ELIXIR proof of concept study on the availability of big datasets on remote compute infrastructure
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Part of the EOSC-Hub project proposal it to establish an ELIXIR Competency Centre (ECC). The EOSC-Hub proposal is currently under review by the EC and a funding decision is expected around late summer 2017 with a tentative project start date of January 2018. The focus of the ECC is to look at the distribution of reference data sets within the EOSC environment and it is proposed by the Compute Platform ExCo to kick-start the work within the ECC through a proof of concept study (funded by the ELIXIR-Hub) on making big data sets available on remote compute infrastructures. Therefore the overall purpose of this Proof of Concept Study is to bring together funded work already taking place within ELIXIR-Excelerate, EUDAT2020 and the ELIXIR nodes into an integrated activity:
This study is now completed, the work is described in the end report. The outcome of this study is summarised in a webinar: This study is associated with: The use of Cloud & VM for training. |
ELIXIR Sweden, ELIXIR Germany, ELIXIR Czech Republic, EMBL-EBI, ELIXIR Finland |
ELIXIR proof of concept study on the availability of big datasets on remote compute infrastructure
|
Part of the EOSC-Hub project proposal it to establish an ELIXIR Competency Centre (ECC). The EOSC-Hub proposal is currently under review by the EC and a funding decision is expected around late summer 2017 with a tentative project start date of January 2018. The focus of the ECC is to look at the distribution of reference data sets within the EOSC environment and it is proposed by the Compute Platform ExCo to kick-start the work within the ECC through a proof of concept study (funded by the ELIXIR-Hub) on making big data sets available on remote compute infrastructures. Therefore the overall purpose of this Proof of Concept Study is to bring together funded work already taking place within ELIXIR-Excelerate, EUDAT2020 and the ELIXIR nodes into an integrated activity:
This study is now completed, the work is described in the end report. The outcome of this study is summarised in a webinar: This study is associated with: The use of Cloud & VM for training. |
ELIXIR Sweden, ELIXIR Germany, ELIXIR Czech Republic, EMBL-EBI, ELIXIR Finland |
ELIXIR proof of concept study on the availability of big datasets on remote compute infrastructure
|
Part of the EOSC-Hub project proposal it to establish an ELIXIR Competency Centre (ECC). The EOSC-Hub proposal is currently under review by the EC and a funding decision is expected around late summer 2017 with a tentative project start date of January 2018. The focus of the ECC is to look at the distribution of reference data sets within the EOSC environment and it is proposed by the Compute Platform ExCo to kick-start the work within the ECC through a proof of concept study (funded by the ELIXIR-Hub) on making big data sets available on remote compute infrastructures. Therefore the overall purpose of this Proof of Concept Study is to bring together funded work already taking place within ELIXIR-Excelerate, EUDAT2020 and the ELIXIR nodes into an integrated activity:
This study is now completed, the work is described in the end report. The outcome of this study is summarised in a webinar: This study is associated with: The use of Cloud & VM for training. |
ELIXIR Sweden, ELIXIR Germany, ELIXIR Czech Republic, EMBL-EBI, ELIXIR Finland |
ELIXIR proof of concept study on the availability of big datasets on remote compute infrastructure
|
Part of the EOSC-Hub project proposal it to establish an ELIXIR Competency Centre (ECC). The EOSC-Hub proposal is currently under review by the EC and a funding decision is expected around late summer 2017 with a tentative project start date of January 2018. The focus of the ECC is to look at the distribution of reference data sets within the EOSC environment and it is proposed by the Compute Platform ExCo to kick-start the work within the ECC through a proof of concept study (funded by the ELIXIR-Hub) on making big data sets available on remote compute infrastructures. Therefore the overall purpose of this Proof of Concept Study is to bring together funded work already taking place within ELIXIR-Excelerate, EUDAT2020 and the ELIXIR nodes into an integrated activity:
This study is now completed, the work is described in the end report. The outcome of this study is summarised in a webinar: This study is associated with: The use of Cloud & VM for training. |
ELIXIR Sweden, ELIXIR Germany, ELIXIR Czech Republic, EMBL-EBI, ELIXIR Finland |
ELIXIR proof of concept study on the availability of big datasets on remote compute infrastructure
|
Part of the EOSC-Hub project proposal it to establish an ELIXIR Competency Centre (ECC). The EOSC-Hub proposal is currently under review by the EC and a funding decision is expected around late summer 2017 with a tentative project start date of January 2018. The focus of the ECC is to look at the distribution of reference data sets within the EOSC environment and it is proposed by the Compute Platform ExCo to kick-start the work within the ECC through a proof of concept study (funded by the ELIXIR-Hub) on making big data sets available on remote compute infrastructures. Therefore the overall purpose of this Proof of Concept Study is to bring together funded work already taking place within ELIXIR-Excelerate, EUDAT2020 and the ELIXIR nodes into an integrated activity:
This study is now completed, the work is described in the end report. The outcome of this study is summarised in a webinar: This study is associated with: The use of Cloud & VM for training. |
ELIXIR Sweden, ELIXIR Germany, ELIXIR Czech Republic, EMBL-EBI, ELIXIR Finland |
Enabling the reuse, extension, scaling, and reproducibility of scientific workflows (2018-cwl)
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The Marine Metagenomics Community has adopted the use of the Common Workflow Language (CWL) as an interoperable way to describe their analysis pipelines. One of the most complex and fully developed CWL workflows implements the EBI metagenomics analysis pipeline. In coordination with MG-RAST, a US based metagenomics analysis pipeline, there are now two different large-scale metagenomics CWL workflows. Each uses a different CWL execution framework (namely Toil and AWE) and are run on different compute infrastructures. During the course of the coming year, the Marine Use Case expects META-pipe (the ELIXIR-NO, marine specific metagenomics pipeline) and other metagenomics related tools (e.g. ITS1 analysis from ELIXIR-IT) to adopt CWL. These additional tools can be used as alternatives for preexisting tools or extend the functionality of the current workflows. This Implementation Study aims to:
To provide an exemplar to both the ELIXIR and the broader scientific communities, we will work through a community case study and ensure that the data, analysis and results conform to a bona fide Research Object (RO), ensuring that they comply with FAIR principles. We will develop appropriate training materials for two key target audiences - producers of (workflows and ROs) and consumers. This study is closely linked with the work of the Bioschemas Community. |
ELIXIR France, ELIXIR UK, EMBL-EBI, ELIXIR Finland |
Enabling the reuse, extension, scaling, and reproducibility of scientific workflows (2018-cwl)
|
The Marine Metagenomics Community has adopted the use of the Common Workflow Language (CWL) as an interoperable way to describe their analysis pipelines. One of the most complex and fully developed CWL workflows implements the EBI metagenomics analysis pipeline. In coordination with MG-RAST, a US based metagenomics analysis pipeline, there are now two different large-scale metagenomics CWL workflows. Each uses a different CWL execution framework (namely Toil and AWE) and are run on different compute infrastructures. During the course of the coming year, the Marine Use Case expects META-pipe (the ELIXIR-NO, marine specific metagenomics pipeline) and other metagenomics related tools (e.g. ITS1 analysis from ELIXIR-IT) to adopt CWL. These additional tools can be used as alternatives for preexisting tools or extend the functionality of the current workflows. This Implementation Study aims to:
To provide an exemplar to both the ELIXIR and the broader scientific communities, we will work through a community case study and ensure that the data, analysis and results conform to a bona fide Research Object (RO), ensuring that they comply with FAIR principles. We will develop appropriate training materials for two key target audiences - producers of (workflows and ROs) and consumers. This study is closely linked with the work of the Bioschemas Community. |
ELIXIR France, ELIXIR UK, EMBL-EBI, ELIXIR Finland |
Enabling the reuse, extension, scaling, and reproducibility of scientific workflows (2018-cwl)
|
The Marine Metagenomics Community has adopted the use of the Common Workflow Language (CWL) as an interoperable way to describe their analysis pipelines. One of the most complex and fully developed CWL workflows implements the EBI metagenomics analysis pipeline. In coordination with MG-RAST, a US based metagenomics analysis pipeline, there are now two different large-scale metagenomics CWL workflows. Each uses a different CWL execution framework (namely Toil and AWE) and are run on different compute infrastructures. During the course of the coming year, the Marine Use Case expects META-pipe (the ELIXIR-NO, marine specific metagenomics pipeline) and other metagenomics related tools (e.g. ITS1 analysis from ELIXIR-IT) to adopt CWL. These additional tools can be used as alternatives for preexisting tools or extend the functionality of the current workflows. This Implementation Study aims to:
To provide an exemplar to both the ELIXIR and the broader scientific communities, we will work through a community case study and ensure that the data, analysis and results conform to a bona fide Research Object (RO), ensuring that they comply with FAIR principles. We will develop appropriate training materials for two key target audiences - producers of (workflows and ROs) and consumers. This study is closely linked with the work of the Bioschemas Community. |
ELIXIR France, ELIXIR UK, EMBL-EBI, ELIXIR Finland |
Enabling the reuse, extension, scaling, and reproducibility of scientific workflows (2018-cwl)
|
The Marine Metagenomics Community has adopted the use of the Common Workflow Language (CWL) as an interoperable way to describe their analysis pipelines. One of the most complex and fully developed CWL workflows implements the EBI metagenomics analysis pipeline. In coordination with MG-RAST, a US based metagenomics analysis pipeline, there are now two different large-scale metagenomics CWL workflows. Each uses a different CWL execution framework (namely Toil and AWE) and are run on different compute infrastructures. During the course of the coming year, the Marine Use Case expects META-pipe (the ELIXIR-NO, marine specific metagenomics pipeline) and other metagenomics related tools (e.g. ITS1 analysis from ELIXIR-IT) to adopt CWL. These additional tools can be used as alternatives for preexisting tools or extend the functionality of the current workflows. This Implementation Study aims to:
To provide an exemplar to both the ELIXIR and the broader scientific communities, we will work through a community case study and ensure that the data, analysis and results conform to a bona fide Research Object (RO), ensuring that they comply with FAIR principles. We will develop appropriate training materials for two key target audiences - producers of (workflows and ROs) and consumers. This study is closely linked with the work of the Bioschemas Community. |
ELIXIR France, ELIXIR UK, EMBL-EBI, ELIXIR Finland |
FAIRness of the current ELIXIR Core resources: Application (and test) of newly available FAIR metrics, and identification of steps to increase interoperability (2018-FAIRCDR)
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The FAIR (Findable, Accessible, Interoperable and Reusable) principles aim to maximize the discovery and reusability of digital resources. While the principles have enjoyed rapid uptake across communities (ELIXIR, G20, EOSC, H2020, NIH), the implementation details remain unclear. Recently, we developed a prototype software infrastructure and a set of metrics to assess the FAIRness of digital resources (http://fairmetrics.org/). In this ELIXIR Implementation Study we will put these into practice for the ELIXIR community by starting to FAIRify ELIXIR Core Data Resources ArrayExpress, ENA, PDBe, PRIDE, CatH, CHEMBL, ChEBI, UNIPROT, HPA, INTERPRO, MINT, and STRING-db. Our study will first establish effective guidelines for implementation, then involve hands-on FAIRification workshops, in which FAIRness will be assessed before and after the work done. Our work will raise awareness around what it takes to be FAIR, and to help drive interoperability between core ELIXIR resources and with efforts outside of ELIXIR. |
ELIXIR Netherlands, ELIXIR UK, EMBL-EBI, ELIXIR Italy, ELIXIR Sweden |
FAIRness of the current ELIXIR Core resources: Application (and test) of newly available FAIR metrics, and identification of steps to increase interoperability (2018-FAIRCDR)
|
The FAIR (Findable, Accessible, Interoperable and Reusable) principles aim to maximize the discovery and reusability of digital resources. While the principles have enjoyed rapid uptake across communities (ELIXIR, G20, EOSC, H2020, NIH), the implementation details remain unclear. Recently, we developed a prototype software infrastructure and a set of metrics to assess the FAIRness of digital resources (http://fairmetrics.org/). In this ELIXIR Implementation Study we will put these into practice for the ELIXIR community by starting to FAIRify ELIXIR Core Data Resources ArrayExpress, ENA, PDBe, PRIDE, CatH, CHEMBL, ChEBI, UNIPROT, HPA, INTERPRO, MINT, and STRING-db. Our study will first establish effective guidelines for implementation, then involve hands-on FAIRification workshops, in which FAIRness will be assessed before and after the work done. Our work will raise awareness around what it takes to be FAIR, and to help drive interoperability between core ELIXIR resources and with efforts outside of ELIXIR. |
ELIXIR Netherlands, ELIXIR UK, EMBL-EBI, ELIXIR Italy, ELIXIR Sweden |
FAIRness of the current ELIXIR Core resources: Application (and test) of newly available FAIR metrics, and identification of steps to increase interoperability (2018-FAIRCDR)
|
The FAIR (Findable, Accessible, Interoperable and Reusable) principles aim to maximize the discovery and reusability of digital resources. While the principles have enjoyed rapid uptake across communities (ELIXIR, G20, EOSC, H2020, NIH), the implementation details remain unclear. Recently, we developed a prototype software infrastructure and a set of metrics to assess the FAIRness of digital resources (http://fairmetrics.org/). In this ELIXIR Implementation Study we will put these into practice for the ELIXIR community by starting to FAIRify ELIXIR Core Data Resources ArrayExpress, ENA, PDBe, PRIDE, CatH, CHEMBL, ChEBI, UNIPROT, HPA, INTERPRO, MINT, and STRING-db. Our study will first establish effective guidelines for implementation, then involve hands-on FAIRification workshops, in which FAIRness will be assessed before and after the work done. Our work will raise awareness around what it takes to be FAIR, and to help drive interoperability between core ELIXIR resources and with efforts outside of ELIXIR. |
ELIXIR Netherlands, ELIXIR UK, EMBL-EBI, ELIXIR Italy, ELIXIR Sweden |
FAIRness of the current ELIXIR Core resources: Application (and test) of newly available FAIR metrics, and identification of steps to increase interoperability (2018-FAIRCDR)
|
The FAIR (Findable, Accessible, Interoperable and Reusable) principles aim to maximize the discovery and reusability of digital resources. While the principles have enjoyed rapid uptake across communities (ELIXIR, G20, EOSC, H2020, NIH), the implementation details remain unclear. Recently, we developed a prototype software infrastructure and a set of metrics to assess the FAIRness of digital resources (http://fairmetrics.org/). In this ELIXIR Implementation Study we will put these into practice for the ELIXIR community by starting to FAIRify ELIXIR Core Data Resources ArrayExpress, ENA, PDBe, PRIDE, CatH, CHEMBL, ChEBI, UNIPROT, HPA, INTERPRO, MINT, and STRING-db. Our study will first establish effective guidelines for implementation, then involve hands-on FAIRification workshops, in which FAIRness will be assessed before and after the work done. Our work will raise awareness around what it takes to be FAIR, and to help drive interoperability between core ELIXIR resources and with efforts outside of ELIXIR. |
ELIXIR Netherlands, ELIXIR UK, EMBL-EBI, ELIXIR Italy, ELIXIR Sweden |
FAIRness of the current ELIXIR Core resources: Application (and test) of newly available FAIR metrics, and identification of steps to increase interoperability (2018-FAIRCDR)
|
The FAIR (Findable, Accessible, Interoperable and Reusable) principles aim to maximize the discovery and reusability of digital resources. While the principles have enjoyed rapid uptake across communities (ELIXIR, G20, EOSC, H2020, NIH), the implementation details remain unclear. Recently, we developed a prototype software infrastructure and a set of metrics to assess the FAIRness of digital resources (http://fairmetrics.org/). In this ELIXIR Implementation Study we will put these into practice for the ELIXIR community by starting to FAIRify ELIXIR Core Data Resources ArrayExpress, ENA, PDBe, PRIDE, CatH, CHEMBL, ChEBI, UNIPROT, HPA, INTERPRO, MINT, and STRING-db. Our study will first establish effective guidelines for implementation, then involve hands-on FAIRification workshops, in which FAIRness will be assessed before and after the work done. Our work will raise awareness around what it takes to be FAIR, and to help drive interoperability between core ELIXIR resources and with efforts outside of ELIXIR. |
ELIXIR Netherlands, ELIXIR UK, EMBL-EBI, ELIXIR Italy, ELIXIR Sweden |
Gap analysis, training materials development and training delivery (2022-23)
|
The objectives of this task are to:
Task 2 will continue to implement the concept of “co-production” between TrP and the collaborating Platforms, Communities or Nodes in the WPs where such interactions are called for. It is important to note for WP2 in particular, that the organization of dedicated hackathons towards preparing new training materials is no longer considered a priority to be funded from TrP Core Funding. However, as it is evident that these training material generation hackathons are still needed, it is expected that they will be funded through other sources such as the co-production model , e.g. by Communities, Platforms, Nodes or other projects that are in need of those hackathons, as well as utilizing the already existing funding schemes by the Hub (Staff Exchange, Travel Grant, etc). |
ELIXIR Greece, ELIXIR Finland, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Italy, ELIXIR UK, ELIXIR Spain, ELIXIR Belgium , ELIXIR Slovenia, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Germany, EMBL-EBI, ELIXIR Ireland |
Gap analysis, training materials development and training delivery (2022-23)
|
The objectives of this task are to:
Task 2 will continue to implement the concept of “co-production” between TrP and the collaborating Platforms, Communities or Nodes in the WPs where such interactions are called for. It is important to note for WP2 in particular, that the organization of dedicated hackathons towards preparing new training materials is no longer considered a priority to be funded from TrP Core Funding. However, as it is evident that these training material generation hackathons are still needed, it is expected that they will be funded through other sources such as the co-production model , e.g. by Communities, Platforms, Nodes or other projects that are in need of those hackathons, as well as utilizing the already existing funding schemes by the Hub (Staff Exchange, Travel Grant, etc). |
ELIXIR Greece, ELIXIR Finland, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Italy, ELIXIR UK, ELIXIR Spain, ELIXIR Belgium , ELIXIR Slovenia, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Germany, EMBL-EBI, ELIXIR Ireland |
Gap analysis, training materials development and training delivery (2022-23)
|
The objectives of this task are to:
Task 2 will continue to implement the concept of “co-production” between TrP and the collaborating Platforms, Communities or Nodes in the WPs where such interactions are called for. It is important to note for WP2 in particular, that the organization of dedicated hackathons towards preparing new training materials is no longer considered a priority to be funded from TrP Core Funding. However, as it is evident that these training material generation hackathons are still needed, it is expected that they will be funded through other sources such as the co-production model , e.g. by Communities, Platforms, Nodes or other projects that are in need of those hackathons, as well as utilizing the already existing funding schemes by the Hub (Staff Exchange, Travel Grant, etc). |
ELIXIR Greece, ELIXIR Finland, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Italy, ELIXIR UK, ELIXIR Spain, ELIXIR Belgium , ELIXIR Slovenia, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Germany, EMBL-EBI, ELIXIR Ireland |
Gap analysis, training materials development and training delivery (2022-23)
|
The objectives of this task are to:
Task 2 will continue to implement the concept of “co-production” between TrP and the collaborating Platforms, Communities or Nodes in the WPs where such interactions are called for. It is important to note for WP2 in particular, that the organization of dedicated hackathons towards preparing new training materials is no longer considered a priority to be funded from TrP Core Funding. However, as it is evident that these training material generation hackathons are still needed, it is expected that they will be funded through other sources such as the co-production model , e.g. by Communities, Platforms, Nodes or other projects that are in need of those hackathons, as well as utilizing the already existing funding schemes by the Hub (Staff Exchange, Travel Grant, etc). |
ELIXIR Greece, ELIXIR Finland, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Italy, ELIXIR UK, ELIXIR Spain, ELIXIR Belgium , ELIXIR Slovenia, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Germany, EMBL-EBI, ELIXIR Ireland |
Gap analysis, training materials development and training delivery (2022-23)
|
The objectives of this task are to:
Task 2 will continue to implement the concept of “co-production” between TrP and the collaborating Platforms, Communities or Nodes in the WPs where such interactions are called for. It is important to note for WP2 in particular, that the organization of dedicated hackathons towards preparing new training materials is no longer considered a priority to be funded from TrP Core Funding. However, as it is evident that these training material generation hackathons are still needed, it is expected that they will be funded through other sources such as the co-production model , e.g. by Communities, Platforms, Nodes or other projects that are in need of those hackathons, as well as utilizing the already existing funding schemes by the Hub (Staff Exchange, Travel Grant, etc). |
ELIXIR Greece, ELIXIR Finland, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Italy, ELIXIR UK, ELIXIR Spain, ELIXIR Belgium , ELIXIR Slovenia, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Germany, EMBL-EBI, ELIXIR Ireland |
Gap analysis, training materials development and training delivery (2022-23)
|
The objectives of this task are to:
Task 2 will continue to implement the concept of “co-production” between TrP and the collaborating Platforms, Communities or Nodes in the WPs where such interactions are called for. It is important to note for WP2 in particular, that the organization of dedicated hackathons towards preparing new training materials is no longer considered a priority to be funded from TrP Core Funding. However, as it is evident that these training material generation hackathons are still needed, it is expected that they will be funded through other sources such as the co-production model , e.g. by Communities, Platforms, Nodes or other projects that are in need of those hackathons, as well as utilizing the already existing funding schemes by the Hub (Staff Exchange, Travel Grant, etc). |
ELIXIR Greece, ELIXIR Finland, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Italy, ELIXIR UK, ELIXIR Spain, ELIXIR Belgium , ELIXIR Slovenia, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Germany, EMBL-EBI, ELIXIR Ireland |
Gap analysis, training materials development and training delivery (2022-23)
|
The objectives of this task are to:
Task 2 will continue to implement the concept of “co-production” between TrP and the collaborating Platforms, Communities or Nodes in the WPs where such interactions are called for. It is important to note for WP2 in particular, that the organization of dedicated hackathons towards preparing new training materials is no longer considered a priority to be funded from TrP Core Funding. However, as it is evident that these training material generation hackathons are still needed, it is expected that they will be funded through other sources such as the co-production model , e.g. by Communities, Platforms, Nodes or other projects that are in need of those hackathons, as well as utilizing the already existing funding schemes by the Hub (Staff Exchange, Travel Grant, etc). |
ELIXIR Greece, ELIXIR Finland, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Italy, ELIXIR UK, ELIXIR Spain, ELIXIR Belgium , ELIXIR Slovenia, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Germany, EMBL-EBI, ELIXIR Ireland |
Gap analysis, training materials development and training delivery (2022-23)
|
The objectives of this task are to:
Task 2 will continue to implement the concept of “co-production” between TrP and the collaborating Platforms, Communities or Nodes in the WPs where such interactions are called for. It is important to note for WP2 in particular, that the organization of dedicated hackathons towards preparing new training materials is no longer considered a priority to be funded from TrP Core Funding. However, as it is evident that these training material generation hackathons are still needed, it is expected that they will be funded through other sources such as the co-production model , e.g. by Communities, Platforms, Nodes or other projects that are in need of those hackathons, as well as utilizing the already existing funding schemes by the Hub (Staff Exchange, Travel Grant, etc). |
ELIXIR Greece, ELIXIR Finland, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Italy, ELIXIR UK, ELIXIR Spain, ELIXIR Belgium , ELIXIR Slovenia, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Germany, EMBL-EBI, ELIXIR Ireland |
Gap analysis, training materials development and training delivery (2022-23)
|
The objectives of this task are to:
Task 2 will continue to implement the concept of “co-production” between TrP and the collaborating Platforms, Communities or Nodes in the WPs where such interactions are called for. It is important to note for WP2 in particular, that the organization of dedicated hackathons towards preparing new training materials is no longer considered a priority to be funded from TrP Core Funding. However, as it is evident that these training material generation hackathons are still needed, it is expected that they will be funded through other sources such as the co-production model , e.g. by Communities, Platforms, Nodes or other projects that are in need of those hackathons, as well as utilizing the already existing funding schemes by the Hub (Staff Exchange, Travel Grant, etc). |
ELIXIR Greece, ELIXIR Finland, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Italy, ELIXIR UK, ELIXIR Spain, ELIXIR Belgium , ELIXIR Slovenia, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Germany, EMBL-EBI, ELIXIR Ireland |
Gap analysis, training materials development and training delivery (2022-23)
|
The objectives of this task are to:
Task 2 will continue to implement the concept of “co-production” between TrP and the collaborating Platforms, Communities or Nodes in the WPs where such interactions are called for. It is important to note for WP2 in particular, that the organization of dedicated hackathons towards preparing new training materials is no longer considered a priority to be funded from TrP Core Funding. However, as it is evident that these training material generation hackathons are still needed, it is expected that they will be funded through other sources such as the co-production model , e.g. by Communities, Platforms, Nodes or other projects that are in need of those hackathons, as well as utilizing the already existing funding schemes by the Hub (Staff Exchange, Travel Grant, etc). |
ELIXIR Greece, ELIXIR Finland, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Italy, ELIXIR UK, ELIXIR Spain, ELIXIR Belgium , ELIXIR Slovenia, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Germany, EMBL-EBI, ELIXIR Ireland |
Gap analysis, training materials development and training delivery (2022-23)
|
The objectives of this task are to:
Task 2 will continue to implement the concept of “co-production” between TrP and the collaborating Platforms, Communities or Nodes in the WPs where such interactions are called for. It is important to note for WP2 in particular, that the organization of dedicated hackathons towards preparing new training materials is no longer considered a priority to be funded from TrP Core Funding. However, as it is evident that these training material generation hackathons are still needed, it is expected that they will be funded through other sources such as the co-production model , e.g. by Communities, Platforms, Nodes or other projects that are in need of those hackathons, as well as utilizing the already existing funding schemes by the Hub (Staff Exchange, Travel Grant, etc). |
ELIXIR Greece, ELIXIR Finland, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Italy, ELIXIR UK, ELIXIR Spain, ELIXIR Belgium , ELIXIR Slovenia, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Germany, EMBL-EBI, ELIXIR Ireland |
Gap analysis, training materials development and training delivery (2022-23)
|
The objectives of this task are to:
Task 2 will continue to implement the concept of “co-production” between TrP and the collaborating Platforms, Communities or Nodes in the WPs where such interactions are called for. It is important to note for WP2 in particular, that the organization of dedicated hackathons towards preparing new training materials is no longer considered a priority to be funded from TrP Core Funding. However, as it is evident that these training material generation hackathons are still needed, it is expected that they will be funded through other sources such as the co-production model , e.g. by Communities, Platforms, Nodes or other projects that are in need of those hackathons, as well as utilizing the already existing funding schemes by the Hub (Staff Exchange, Travel Grant, etc). |
ELIXIR Greece, ELIXIR Finland, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Italy, ELIXIR UK, ELIXIR Spain, ELIXIR Belgium , ELIXIR Slovenia, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Germany, EMBL-EBI, ELIXIR Ireland |
Gap analysis, training materials development and training delivery (2022-23)
|
The objectives of this task are to:
Task 2 will continue to implement the concept of “co-production” between TrP and the collaborating Platforms, Communities or Nodes in the WPs where such interactions are called for. It is important to note for WP2 in particular, that the organization of dedicated hackathons towards preparing new training materials is no longer considered a priority to be funded from TrP Core Funding. However, as it is evident that these training material generation hackathons are still needed, it is expected that they will be funded through other sources such as the co-production model , e.g. by Communities, Platforms, Nodes or other projects that are in need of those hackathons, as well as utilizing the already existing funding schemes by the Hub (Staff Exchange, Travel Grant, etc). |
ELIXIR Greece, ELIXIR Finland, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Italy, ELIXIR UK, ELIXIR Spain, ELIXIR Belgium , ELIXIR Slovenia, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Germany, EMBL-EBI, ELIXIR Ireland |
Gap analysis, training materials development and training delivery (2022-23)
|
The objectives of this task are to:
Task 2 will continue to implement the concept of “co-production” between TrP and the collaborating Platforms, Communities or Nodes in the WPs where such interactions are called for. It is important to note for WP2 in particular, that the organization of dedicated hackathons towards preparing new training materials is no longer considered a priority to be funded from TrP Core Funding. However, as it is evident that these training material generation hackathons are still needed, it is expected that they will be funded through other sources such as the co-production model , e.g. by Communities, Platforms, Nodes or other projects that are in need of those hackathons, as well as utilizing the already existing funding schemes by the Hub (Staff Exchange, Travel Grant, etc). |
ELIXIR Greece, ELIXIR Finland, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Italy, ELIXIR UK, ELIXIR Spain, ELIXIR Belgium , ELIXIR Slovenia, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Germany, EMBL-EBI, ELIXIR Ireland |
Gap analysis, training materials development and training delivery
|
Gap analysis, training materials development and training deliveryThe objectives of this task are to:
This study will develop a 'Co-production' model whereby the Training Platform works with a Platform, Community or Node to plan training events, requiring commitment (expertise and/or funding) from the appropriate body. Under current funding, the Training Platform wil be able to support, each year:
WP1 - Gap analysis in ELIXIR Platforms, Communities, Nodes and Industry Work Package 1 will produce a biannual report on the training needs and gaps for all ELIXIR Platforms and Communities with a prioritization of training courses, through dedicated surveys and in a limited number of dedicated meetings between the TrP and representatives of the Platforms, Communities, Nodes, resource providers and Industry WP2 - Development of Training materials for identified gaps and for ELIXIR Services, Resources, and Communities The Training Platform will organize hackathons to gather the experts in the identified topics and together produce training materials, to be made available in TeSS, adhering to the concepts of FAIR (also in relationship with the respective group of the TrP), and tracking of their reuse available. The use of such materials will be promoted in
WP3 - Scaling up ELIXIR Training The Training Platform will launch a competitive RFP to select topics for a limited number of training courses, and will also support running of new or mature courses which are organized and funded by other Platforms, Communities or Nodes. |
ELIXIR Greece, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Netherlands, ELIXIR Italy, ELIXIR Hungary, ELIXIR Portugal, ELIXIR Norway, ELIXIR Luxembourg, ELIXIR France |
Gap analysis, training materials development and training delivery
|
Gap analysis, training materials development and training deliveryThe objectives of this task are to:
This study will develop a 'Co-production' model whereby the Training Platform works with a Platform, Community or Node to plan training events, requiring commitment (expertise and/or funding) from the appropriate body. Under current funding, the Training Platform wil be able to support, each year:
WP1 - Gap analysis in ELIXIR Platforms, Communities, Nodes and Industry Work Package 1 will produce a biannual report on the training needs and gaps for all ELIXIR Platforms and Communities with a prioritization of training courses, through dedicated surveys and in a limited number of dedicated meetings between the TrP and representatives of the Platforms, Communities, Nodes, resource providers and Industry WP2 - Development of Training materials for identified gaps and for ELIXIR Services, Resources, and Communities The Training Platform will organize hackathons to gather the experts in the identified topics and together produce training materials, to be made available in TeSS, adhering to the concepts of FAIR (also in relationship with the respective group of the TrP), and tracking of their reuse available. The use of such materials will be promoted in
WP3 - Scaling up ELIXIR Training The Training Platform will launch a competitive RFP to select topics for a limited number of training courses, and will also support running of new or mature courses which are organized and funded by other Platforms, Communities or Nodes. |
ELIXIR Greece, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Netherlands, ELIXIR Italy, ELIXIR Hungary, ELIXIR Portugal, ELIXIR Norway, ELIXIR Luxembourg, ELIXIR France |
Gap analysis, training materials development and training delivery
|
Gap analysis, training materials development and training deliveryThe objectives of this task are to:
This study will develop a 'Co-production' model whereby the Training Platform works with a Platform, Community or Node to plan training events, requiring commitment (expertise and/or funding) from the appropriate body. Under current funding, the Training Platform wil be able to support, each year:
WP1 - Gap analysis in ELIXIR Platforms, Communities, Nodes and Industry Work Package 1 will produce a biannual report on the training needs and gaps for all ELIXIR Platforms and Communities with a prioritization of training courses, through dedicated surveys and in a limited number of dedicated meetings between the TrP and representatives of the Platforms, Communities, Nodes, resource providers and Industry WP2 - Development of Training materials for identified gaps and for ELIXIR Services, Resources, and Communities The Training Platform will organize hackathons to gather the experts in the identified topics and together produce training materials, to be made available in TeSS, adhering to the concepts of FAIR (also in relationship with the respective group of the TrP), and tracking of their reuse available. The use of such materials will be promoted in
WP3 - Scaling up ELIXIR Training The Training Platform will launch a competitive RFP to select topics for a limited number of training courses, and will also support running of new or mature courses which are organized and funded by other Platforms, Communities or Nodes. |
ELIXIR Greece, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Netherlands, ELIXIR Italy, ELIXIR Hungary, ELIXIR Portugal, ELIXIR Norway, ELIXIR Luxembourg, ELIXIR France |
Gap analysis, training materials development and training delivery
|
Gap analysis, training materials development and training deliveryThe objectives of this task are to:
This study will develop a 'Co-production' model whereby the Training Platform works with a Platform, Community or Node to plan training events, requiring commitment (expertise and/or funding) from the appropriate body. Under current funding, the Training Platform wil be able to support, each year:
WP1 - Gap analysis in ELIXIR Platforms, Communities, Nodes and Industry Work Package 1 will produce a biannual report on the training needs and gaps for all ELIXIR Platforms and Communities with a prioritization of training courses, through dedicated surveys and in a limited number of dedicated meetings between the TrP and representatives of the Platforms, Communities, Nodes, resource providers and Industry WP2 - Development of Training materials for identified gaps and for ELIXIR Services, Resources, and Communities The Training Platform will organize hackathons to gather the experts in the identified topics and together produce training materials, to be made available in TeSS, adhering to the concepts of FAIR (also in relationship with the respective group of the TrP), and tracking of their reuse available. The use of such materials will be promoted in
WP3 - Scaling up ELIXIR Training The Training Platform will launch a competitive RFP to select topics for a limited number of training courses, and will also support running of new or mature courses which are organized and funded by other Platforms, Communities or Nodes. |
ELIXIR Greece, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Netherlands, ELIXIR Italy, ELIXIR Hungary, ELIXIR Portugal, ELIXIR Norway, ELIXIR Luxembourg, ELIXIR France |
Gap analysis, training materials development and training delivery
|
Gap analysis, training materials development and training deliveryThe objectives of this task are to:
This study will develop a 'Co-production' model whereby the Training Platform works with a Platform, Community or Node to plan training events, requiring commitment (expertise and/or funding) from the appropriate body. Under current funding, the Training Platform wil be able to support, each year:
WP1 - Gap analysis in ELIXIR Platforms, Communities, Nodes and Industry Work Package 1 will produce a biannual report on the training needs and gaps for all ELIXIR Platforms and Communities with a prioritization of training courses, through dedicated surveys and in a limited number of dedicated meetings between the TrP and representatives of the Platforms, Communities, Nodes, resource providers and Industry WP2 - Development of Training materials for identified gaps and for ELIXIR Services, Resources, and Communities The Training Platform will organize hackathons to gather the experts in the identified topics and together produce training materials, to be made available in TeSS, adhering to the concepts of FAIR (also in relationship with the respective group of the TrP), and tracking of their reuse available. The use of such materials will be promoted in
WP3 - Scaling up ELIXIR Training The Training Platform will launch a competitive RFP to select topics for a limited number of training courses, and will also support running of new or mature courses which are organized and funded by other Platforms, Communities or Nodes. |
ELIXIR Greece, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Netherlands, ELIXIR Italy, ELIXIR Hungary, ELIXIR Portugal, ELIXIR Norway, ELIXIR Luxembourg, ELIXIR France |
Gap analysis, training materials development and training delivery
|
Gap analysis, training materials development and training deliveryThe objectives of this task are to:
This study will develop a 'Co-production' model whereby the Training Platform works with a Platform, Community or Node to plan training events, requiring commitment (expertise and/or funding) from the appropriate body. Under current funding, the Training Platform wil be able to support, each year:
WP1 - Gap analysis in ELIXIR Platforms, Communities, Nodes and Industry Work Package 1 will produce a biannual report on the training needs and gaps for all ELIXIR Platforms and Communities with a prioritization of training courses, through dedicated surveys and in a limited number of dedicated meetings between the TrP and representatives of the Platforms, Communities, Nodes, resource providers and Industry WP2 - Development of Training materials for identified gaps and for ELIXIR Services, Resources, and Communities The Training Platform will organize hackathons to gather the experts in the identified topics and together produce training materials, to be made available in TeSS, adhering to the concepts of FAIR (also in relationship with the respective group of the TrP), and tracking of their reuse available. The use of such materials will be promoted in
WP3 - Scaling up ELIXIR Training The Training Platform will launch a competitive RFP to select topics for a limited number of training courses, and will also support running of new or mature courses which are organized and funded by other Platforms, Communities or Nodes. |
ELIXIR Greece, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Netherlands, ELIXIR Italy, ELIXIR Hungary, ELIXIR Portugal, ELIXIR Norway, ELIXIR Luxembourg, ELIXIR France |
Gap analysis, training materials development and training delivery
|
Gap analysis, training materials development and training deliveryThe objectives of this task are to:
This study will develop a 'Co-production' model whereby the Training Platform works with a Platform, Community or Node to plan training events, requiring commitment (expertise and/or funding) from the appropriate body. Under current funding, the Training Platform wil be able to support, each year:
WP1 - Gap analysis in ELIXIR Platforms, Communities, Nodes and Industry Work Package 1 will produce a biannual report on the training needs and gaps for all ELIXIR Platforms and Communities with a prioritization of training courses, through dedicated surveys and in a limited number of dedicated meetings between the TrP and representatives of the Platforms, Communities, Nodes, resource providers and Industry WP2 - Development of Training materials for identified gaps and for ELIXIR Services, Resources, and Communities The Training Platform will organize hackathons to gather the experts in the identified topics and together produce training materials, to be made available in TeSS, adhering to the concepts of FAIR (also in relationship with the respective group of the TrP), and tracking of their reuse available. The use of such materials will be promoted in
WP3 - Scaling up ELIXIR Training The Training Platform will launch a competitive RFP to select topics for a limited number of training courses, and will also support running of new or mature courses which are organized and funded by other Platforms, Communities or Nodes. |
ELIXIR Greece, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Netherlands, ELIXIR Italy, ELIXIR Hungary, ELIXIR Portugal, ELIXIR Norway, ELIXIR Luxembourg, ELIXIR France |
Gap analysis, training materials development and training delivery
|
Gap analysis, training materials development and training deliveryThe objectives of this task are to:
This study will develop a 'Co-production' model whereby the Training Platform works with a Platform, Community or Node to plan training events, requiring commitment (expertise and/or funding) from the appropriate body. Under current funding, the Training Platform wil be able to support, each year:
WP1 - Gap analysis in ELIXIR Platforms, Communities, Nodes and Industry Work Package 1 will produce a biannual report on the training needs and gaps for all ELIXIR Platforms and Communities with a prioritization of training courses, through dedicated surveys and in a limited number of dedicated meetings between the TrP and representatives of the Platforms, Communities, Nodes, resource providers and Industry WP2 - Development of Training materials for identified gaps and for ELIXIR Services, Resources, and Communities The Training Platform will organize hackathons to gather the experts in the identified topics and together produce training materials, to be made available in TeSS, adhering to the concepts of FAIR (also in relationship with the respective group of the TrP), and tracking of their reuse available. The use of such materials will be promoted in
WP3 - Scaling up ELIXIR Training The Training Platform will launch a competitive RFP to select topics for a limited number of training courses, and will also support running of new or mature courses which are organized and funded by other Platforms, Communities or Nodes. |
ELIXIR Greece, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Netherlands, ELIXIR Italy, ELIXIR Hungary, ELIXIR Portugal, ELIXIR Norway, ELIXIR Luxembourg, ELIXIR France |
Gap analysis, training materials development and training delivery
|
Gap analysis, training materials development and training deliveryThe objectives of this task are to:
This study will develop a 'Co-production' model whereby the Training Platform works with a Platform, Community or Node to plan training events, requiring commitment (expertise and/or funding) from the appropriate body. Under current funding, the Training Platform wil be able to support, each year:
WP1 - Gap analysis in ELIXIR Platforms, Communities, Nodes and Industry Work Package 1 will produce a biannual report on the training needs and gaps for all ELIXIR Platforms and Communities with a prioritization of training courses, through dedicated surveys and in a limited number of dedicated meetings between the TrP and representatives of the Platforms, Communities, Nodes, resource providers and Industry WP2 - Development of Training materials for identified gaps and for ELIXIR Services, Resources, and Communities The Training Platform will organize hackathons to gather the experts in the identified topics and together produce training materials, to be made available in TeSS, adhering to the concepts of FAIR (also in relationship with the respective group of the TrP), and tracking of their reuse available. The use of such materials will be promoted in
WP3 - Scaling up ELIXIR Training The Training Platform will launch a competitive RFP to select topics for a limited number of training courses, and will also support running of new or mature courses which are organized and funded by other Platforms, Communities or Nodes. |
ELIXIR Greece, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Netherlands, ELIXIR Italy, ELIXIR Hungary, ELIXIR Portugal, ELIXIR Norway, ELIXIR Luxembourg, ELIXIR France |
Gap analysis, training materials development and training delivery
|
Gap analysis, training materials development and training deliveryThe objectives of this task are to:
This study will develop a 'Co-production' model whereby the Training Platform works with a Platform, Community or Node to plan training events, requiring commitment (expertise and/or funding) from the appropriate body. Under current funding, the Training Platform wil be able to support, each year:
WP1 - Gap analysis in ELIXIR Platforms, Communities, Nodes and Industry Work Package 1 will produce a biannual report on the training needs and gaps for all ELIXIR Platforms and Communities with a prioritization of training courses, through dedicated surveys and in a limited number of dedicated meetings between the TrP and representatives of the Platforms, Communities, Nodes, resource providers and Industry WP2 - Development of Training materials for identified gaps and for ELIXIR Services, Resources, and Communities The Training Platform will organize hackathons to gather the experts in the identified topics and together produce training materials, to be made available in TeSS, adhering to the concepts of FAIR (also in relationship with the respective group of the TrP), and tracking of their reuse available. The use of such materials will be promoted in
WP3 - Scaling up ELIXIR Training The Training Platform will launch a competitive RFP to select topics for a limited number of training courses, and will also support running of new or mature courses which are organized and funded by other Platforms, Communities or Nodes. |
ELIXIR Greece, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Netherlands, ELIXIR Italy, ELIXIR Hungary, ELIXIR Portugal, ELIXIR Norway, ELIXIR Luxembourg, ELIXIR France |
Initiating interactions in training in bioinformatics and data management between ELIXIR and Brazilian R&I organisations
|
This staff exchange program aims at enhancing the collaboration of the Portuguese and Swiss Nodes to initiate
The participants intend to collectively plan and deliver a course in biological data management, during which
Ongoing activities to establish national leagues of bioinformatics students in Portugal and Brazil will have a Impact statement |
ELIXIR Portugal, ELIXIR Switzerland |
Initiating interactions in training in bioinformatics and data management between ELIXIR and Brazilian R&I organisations
|
This staff exchange program aims at enhancing the collaboration of the Portuguese and Swiss Nodes to initiate
The participants intend to collectively plan and deliver a course in biological data management, during which
Ongoing activities to establish national leagues of bioinformatics students in Portugal and Brazil will have a Impact statement |
ELIXIR Portugal, ELIXIR Switzerland |
Mapping the landscape of Biocuration in ELIXIR: Practice, capability and training requirements
|
This implementation study is designed to
The outcomes of this study have been published in F1000Research and were presented in a webinar. Part of this work has been presented in the ISB Biocuration 2019 meeting (Cambridge, UK, April 2019):
and also in the ELIXIR All-Hands Meeting 2019 (Lisbon, Portugal, June 2019):
This work is carried out in collaboration with |
ELIXIR UK, ELIXIR Switzerland, EMBL-EBI, ELIXIR Luxembourg, ELIXIR Slovenia |
Mapping the landscape of Biocuration in ELIXIR: Practice, capability and training requirements
|
This implementation study is designed to
The outcomes of this study have been published in F1000Research and were presented in a webinar. Part of this work has been presented in the ISB Biocuration 2019 meeting (Cambridge, UK, April 2019):
and also in the ELIXIR All-Hands Meeting 2019 (Lisbon, Portugal, June 2019):
This work is carried out in collaboration with |
ELIXIR UK, ELIXIR Switzerland, EMBL-EBI, ELIXIR Luxembourg, ELIXIR Slovenia |
Mapping the landscape of Biocuration in ELIXIR: Practice, capability and training requirements
|
This implementation study is designed to
The outcomes of this study have been published in F1000Research and were presented in a webinar. Part of this work has been presented in the ISB Biocuration 2019 meeting (Cambridge, UK, April 2019):
and also in the ELIXIR All-Hands Meeting 2019 (Lisbon, Portugal, June 2019):
This work is carried out in collaboration with |
ELIXIR UK, ELIXIR Switzerland, EMBL-EBI, ELIXIR Luxembourg, ELIXIR Slovenia |
Mapping the landscape of Biocuration in ELIXIR: Practice, capability and training requirements
|
This implementation study is designed to
The outcomes of this study have been published in F1000Research and were presented in a webinar. Part of this work has been presented in the ISB Biocuration 2019 meeting (Cambridge, UK, April 2019):
and also in the ELIXIR All-Hands Meeting 2019 (Lisbon, Portugal, June 2019):
This work is carried out in collaboration with |
ELIXIR UK, ELIXIR Switzerland, EMBL-EBI, ELIXIR Luxembourg, ELIXIR Slovenia |
Mapping the landscape of Biocuration in ELIXIR: Practice, capability and training requirements
|
This implementation study is designed to
The outcomes of this study have been published in F1000Research and were presented in a webinar. Part of this work has been presented in the ISB Biocuration 2019 meeting (Cambridge, UK, April 2019):
and also in the ELIXIR All-Hands Meeting 2019 (Lisbon, Portugal, June 2019):
This work is carried out in collaboration with |
ELIXIR UK, ELIXIR Switzerland, EMBL-EBI, ELIXIR Luxembourg, ELIXIR Slovenia |
TeSS - The ELIXIR Training Portal (2022-23)
|
TeSS is the ELIXIR Training Portal, and has been developed in the Training Platform programme The TeSS Infrastructure Service sets out to develop the TeSS as a full fledged infrastructure |
ELIXIR UK, ELIXIR Estonia, ELIXIR Sweden, ELIXIR Italy |
TeSS - The ELIXIR Training Portal (2022-23)
|
TeSS is the ELIXIR Training Portal, and has been developed in the Training Platform programme The TeSS Infrastructure Service sets out to develop the TeSS as a full fledged infrastructure |
ELIXIR UK, ELIXIR Estonia, ELIXIR Sweden, ELIXIR Italy |
TeSS - The ELIXIR Training Portal (2022-23)
|
TeSS is the ELIXIR Training Portal, and has been developed in the Training Platform programme The TeSS Infrastructure Service sets out to develop the TeSS as a full fledged infrastructure |
ELIXIR UK, ELIXIR Estonia, ELIXIR Sweden, ELIXIR Italy |
TeSS - The ELIXIR Training Portal (2022-23)
|
TeSS is the ELIXIR Training Portal, and has been developed in the Training Platform programme The TeSS Infrastructure Service sets out to develop the TeSS as a full fledged infrastructure |
ELIXIR UK, ELIXIR Estonia, ELIXIR Sweden, ELIXIR Italy |
Towards Data Stewardship in ELIXIR: Training and Portal
|
Scientists have been managing data ever since they collected specimens and shared results of their study with their peers. The advent of the digital computer has allowed for data acquisition in unprecedented amounts to the extent that the organisational task of data management (DM) has become a core activity. Also, external pressure is rising on researchers in general to make sure their experiments are reproducible and that the resulting data is accessible and reusable for others for a longer time (“data stewardship”, DS). This pressure puts even higher demands on the data management practice. Data management and stewardship plans will be a prerequisite for most (public) funding soon. However, data management and data stewardship are not everyday practice for researchers and they are considered more of an administrative task rather than a contribution to proper research. The goal of this implementation study is to kick-start coherent DM/DS activities in ELIXIR and formulate and implement first solutions for good DM/DS in ELIXIR. Currently, there are two main activities in this project, namely to develop and deliver training in DM/DS, as well as to build an infrastructure component (portal or wizard) to support good DM/DS. These two parts will use each other’s results but be executed as separate and complementary projects. More investments are needed after this period to reach a broader audience and feedback experience. DM/DS methods particularly for larger research projects for instance require more structural planning and are not in the scope of this Implementation Study. The two main target audiences for both of these activities are life science researchers who have to make DS plans on the one hand, and data stewards, curators, data managers and other experts in data handling on the other hand. In addition, members of these audiences who are involved in ELIXIR will be asked to actively contribute and help assemble and review the information for the training events, as well as the content of the portal. |
ELIXIR Netherlands, ELIXIR Czech Republic, ELIXIR Luxembourg, ELIXIR Switzerland, ELIXIR Slovenia, ELIXIR UK, ELIXIR Estonia, ELIXIR Portugal, ELIXIR France, ELIXIR Norway, EMBL-EBI, ELIXIR Sweden, ELIXIR Belgium |
Towards Data Stewardship in ELIXIR: Training and Portal
|
Scientists have been managing data ever since they collected specimens and shared results of their study with their peers. The advent of the digital computer has allowed for data acquisition in unprecedented amounts to the extent that the organisational task of data management (DM) has become a core activity. Also, external pressure is rising on researchers in general to make sure their experiments are reproducible and that the resulting data is accessible and reusable for others for a longer time (“data stewardship”, DS). This pressure puts even higher demands on the data management practice. Data management and stewardship plans will be a prerequisite for most (public) funding soon. However, data management and data stewardship are not everyday practice for researchers and they are considered more of an administrative task rather than a contribution to proper research. The goal of this implementation study is to kick-start coherent DM/DS activities in ELIXIR and formulate and implement first solutions for good DM/DS in ELIXIR. Currently, there are two main activities in this project, namely to develop and deliver training in DM/DS, as well as to build an infrastructure component (portal or wizard) to support good DM/DS. These two parts will use each other’s results but be executed as separate and complementary projects. More investments are needed after this period to reach a broader audience and feedback experience. DM/DS methods particularly for larger research projects for instance require more structural planning and are not in the scope of this Implementation Study. The two main target audiences for both of these activities are life science researchers who have to make DS plans on the one hand, and data stewards, curators, data managers and other experts in data handling on the other hand. In addition, members of these audiences who are involved in ELIXIR will be asked to actively contribute and help assemble and review the information for the training events, as well as the content of the portal. |
ELIXIR Netherlands, ELIXIR Czech Republic, ELIXIR Luxembourg, ELIXIR Switzerland, ELIXIR Slovenia, ELIXIR UK, ELIXIR Estonia, ELIXIR Portugal, ELIXIR France, ELIXIR Norway, EMBL-EBI, ELIXIR Sweden, ELIXIR Belgium |
Towards Data Stewardship in ELIXIR: Training and Portal
|
Scientists have been managing data ever since they collected specimens and shared results of their study with their peers. The advent of the digital computer has allowed for data acquisition in unprecedented amounts to the extent that the organisational task of data management (DM) has become a core activity. Also, external pressure is rising on researchers in general to make sure their experiments are reproducible and that the resulting data is accessible and reusable for others for a longer time (“data stewardship”, DS). This pressure puts even higher demands on the data management practice. Data management and stewardship plans will be a prerequisite for most (public) funding soon. However, data management and data stewardship are not everyday practice for researchers and they are considered more of an administrative task rather than a contribution to proper research. The goal of this implementation study is to kick-start coherent DM/DS activities in ELIXIR and formulate and implement first solutions for good DM/DS in ELIXIR. Currently, there are two main activities in this project, namely to develop and deliver training in DM/DS, as well as to build an infrastructure component (portal or wizard) to support good DM/DS. These two parts will use each other’s results but be executed as separate and complementary projects. More investments are needed after this period to reach a broader audience and feedback experience. DM/DS methods particularly for larger research projects for instance require more structural planning and are not in the scope of this Implementation Study. The two main target audiences for both of these activities are life science researchers who have to make DS plans on the one hand, and data stewards, curators, data managers and other experts in data handling on the other hand. In addition, members of these audiences who are involved in ELIXIR will be asked to actively contribute and help assemble and review the information for the training events, as well as the content of the portal. |
ELIXIR Netherlands, ELIXIR Czech Republic, ELIXIR Luxembourg, ELIXIR Switzerland, ELIXIR Slovenia, ELIXIR UK, ELIXIR Estonia, ELIXIR Portugal, ELIXIR France, ELIXIR Norway, EMBL-EBI, ELIXIR Sweden, ELIXIR Belgium |
Towards Data Stewardship in ELIXIR: Training and Portal
|
Scientists have been managing data ever since they collected specimens and shared results of their study with their peers. The advent of the digital computer has allowed for data acquisition in unprecedented amounts to the extent that the organisational task of data management (DM) has become a core activity. Also, external pressure is rising on researchers in general to make sure their experiments are reproducible and that the resulting data is accessible and reusable for others for a longer time (“data stewardship”, DS). This pressure puts even higher demands on the data management practice. Data management and stewardship plans will be a prerequisite for most (public) funding soon. However, data management and data stewardship are not everyday practice for researchers and they are considered more of an administrative task rather than a contribution to proper research. The goal of this implementation study is to kick-start coherent DM/DS activities in ELIXIR and formulate and implement first solutions for good DM/DS in ELIXIR. Currently, there are two main activities in this project, namely to develop and deliver training in DM/DS, as well as to build an infrastructure component (portal or wizard) to support good DM/DS. These two parts will use each other’s results but be executed as separate and complementary projects. More investments are needed after this period to reach a broader audience and feedback experience. DM/DS methods particularly for larger research projects for instance require more structural planning and are not in the scope of this Implementation Study. The two main target audiences for both of these activities are life science researchers who have to make DS plans on the one hand, and data stewards, curators, data managers and other experts in data handling on the other hand. In addition, members of these audiences who are involved in ELIXIR will be asked to actively contribute and help assemble and review the information for the training events, as well as the content of the portal. |
ELIXIR Netherlands, ELIXIR Czech Republic, ELIXIR Luxembourg, ELIXIR Switzerland, ELIXIR Slovenia, ELIXIR UK, ELIXIR Estonia, ELIXIR Portugal, ELIXIR France, ELIXIR Norway, EMBL-EBI, ELIXIR Sweden, ELIXIR Belgium |
Towards Data Stewardship in ELIXIR: Training and Portal
|
Scientists have been managing data ever since they collected specimens and shared results of their study with their peers. The advent of the digital computer has allowed for data acquisition in unprecedented amounts to the extent that the organisational task of data management (DM) has become a core activity. Also, external pressure is rising on researchers in general to make sure their experiments are reproducible and that the resulting data is accessible and reusable for others for a longer time (“data stewardship”, DS). This pressure puts even higher demands on the data management practice. Data management and stewardship plans will be a prerequisite for most (public) funding soon. However, data management and data stewardship are not everyday practice for researchers and they are considered more of an administrative task rather than a contribution to proper research. The goal of this implementation study is to kick-start coherent DM/DS activities in ELIXIR and formulate and implement first solutions for good DM/DS in ELIXIR. Currently, there are two main activities in this project, namely to develop and deliver training in DM/DS, as well as to build an infrastructure component (portal or wizard) to support good DM/DS. These two parts will use each other’s results but be executed as separate and complementary projects. More investments are needed after this period to reach a broader audience and feedback experience. DM/DS methods particularly for larger research projects for instance require more structural planning and are not in the scope of this Implementation Study. The two main target audiences for both of these activities are life science researchers who have to make DS plans on the one hand, and data stewards, curators, data managers and other experts in data handling on the other hand. In addition, members of these audiences who are involved in ELIXIR will be asked to actively contribute and help assemble and review the information for the training events, as well as the content of the portal. |
ELIXIR Netherlands, ELIXIR Czech Republic, ELIXIR Luxembourg, ELIXIR Switzerland, ELIXIR Slovenia, ELIXIR UK, ELIXIR Estonia, ELIXIR Portugal, ELIXIR France, ELIXIR Norway, EMBL-EBI, ELIXIR Sweden, ELIXIR Belgium |
Towards Data Stewardship in ELIXIR: Training and Portal
|
Scientists have been managing data ever since they collected specimens and shared results of their study with their peers. The advent of the digital computer has allowed for data acquisition in unprecedented amounts to the extent that the organisational task of data management (DM) has become a core activity. Also, external pressure is rising on researchers in general to make sure their experiments are reproducible and that the resulting data is accessible and reusable for others for a longer time (“data stewardship”, DS). This pressure puts even higher demands on the data management practice. Data management and stewardship plans will be a prerequisite for most (public) funding soon. However, data management and data stewardship are not everyday practice for researchers and they are considered more of an administrative task rather than a contribution to proper research. The goal of this implementation study is to kick-start coherent DM/DS activities in ELIXIR and formulate and implement first solutions for good DM/DS in ELIXIR. Currently, there are two main activities in this project, namely to develop and deliver training in DM/DS, as well as to build an infrastructure component (portal or wizard) to support good DM/DS. These two parts will use each other’s results but be executed as separate and complementary projects. More investments are needed after this period to reach a broader audience and feedback experience. DM/DS methods particularly for larger research projects for instance require more structural planning and are not in the scope of this Implementation Study. The two main target audiences for both of these activities are life science researchers who have to make DS plans on the one hand, and data stewards, curators, data managers and other experts in data handling on the other hand. In addition, members of these audiences who are involved in ELIXIR will be asked to actively contribute and help assemble and review the information for the training events, as well as the content of the portal. |
ELIXIR Netherlands, ELIXIR Czech Republic, ELIXIR Luxembourg, ELIXIR Switzerland, ELIXIR Slovenia, ELIXIR UK, ELIXIR Estonia, ELIXIR Portugal, ELIXIR France, ELIXIR Norway, EMBL-EBI, ELIXIR Sweden, ELIXIR Belgium |
Towards Data Stewardship in ELIXIR: Training and Portal
|
Scientists have been managing data ever since they collected specimens and shared results of their study with their peers. The advent of the digital computer has allowed for data acquisition in unprecedented amounts to the extent that the organisational task of data management (DM) has become a core activity. Also, external pressure is rising on researchers in general to make sure their experiments are reproducible and that the resulting data is accessible and reusable for others for a longer time (“data stewardship”, DS). This pressure puts even higher demands on the data management practice. Data management and stewardship plans will be a prerequisite for most (public) funding soon. However, data management and data stewardship are not everyday practice for researchers and they are considered more of an administrative task rather than a contribution to proper research. The goal of this implementation study is to kick-start coherent DM/DS activities in ELIXIR and formulate and implement first solutions for good DM/DS in ELIXIR. Currently, there are two main activities in this project, namely to develop and deliver training in DM/DS, as well as to build an infrastructure component (portal or wizard) to support good DM/DS. These two parts will use each other’s results but be executed as separate and complementary projects. More investments are needed after this period to reach a broader audience and feedback experience. DM/DS methods particularly for larger research projects for instance require more structural planning and are not in the scope of this Implementation Study. The two main target audiences for both of these activities are life science researchers who have to make DS plans on the one hand, and data stewards, curators, data managers and other experts in data handling on the other hand. In addition, members of these audiences who are involved in ELIXIR will be asked to actively contribute and help assemble and review the information for the training events, as well as the content of the portal. |
ELIXIR Netherlands, ELIXIR Czech Republic, ELIXIR Luxembourg, ELIXIR Switzerland, ELIXIR Slovenia, ELIXIR UK, ELIXIR Estonia, ELIXIR Portugal, ELIXIR France, ELIXIR Norway, EMBL-EBI, ELIXIR Sweden, ELIXIR Belgium |
Towards Data Stewardship in ELIXIR: Training and Portal
|
Scientists have been managing data ever since they collected specimens and shared results of their study with their peers. The advent of the digital computer has allowed for data acquisition in unprecedented amounts to the extent that the organisational task of data management (DM) has become a core activity. Also, external pressure is rising on researchers in general to make sure their experiments are reproducible and that the resulting data is accessible and reusable for others for a longer time (“data stewardship”, DS). This pressure puts even higher demands on the data management practice. Data management and stewardship plans will be a prerequisite for most (public) funding soon. However, data management and data stewardship are not everyday practice for researchers and they are considered more of an administrative task rather than a contribution to proper research. The goal of this implementation study is to kick-start coherent DM/DS activities in ELIXIR and formulate and implement first solutions for good DM/DS in ELIXIR. Currently, there are two main activities in this project, namely to develop and deliver training in DM/DS, as well as to build an infrastructure component (portal or wizard) to support good DM/DS. These two parts will use each other’s results but be executed as separate and complementary projects. More investments are needed after this period to reach a broader audience and feedback experience. DM/DS methods particularly for larger research projects for instance require more structural planning and are not in the scope of this Implementation Study. The two main target audiences for both of these activities are life science researchers who have to make DS plans on the one hand, and data stewards, curators, data managers and other experts in data handling on the other hand. In addition, members of these audiences who are involved in ELIXIR will be asked to actively contribute and help assemble and review the information for the training events, as well as the content of the portal. |
ELIXIR Netherlands, ELIXIR Czech Republic, ELIXIR Luxembourg, ELIXIR Switzerland, ELIXIR Slovenia, ELIXIR UK, ELIXIR Estonia, ELIXIR Portugal, ELIXIR France, ELIXIR Norway, EMBL-EBI, ELIXIR Sweden, ELIXIR Belgium |
Towards Data Stewardship in ELIXIR: Training and Portal
|
Scientists have been managing data ever since they collected specimens and shared results of their study with their peers. The advent of the digital computer has allowed for data acquisition in unprecedented amounts to the extent that the organisational task of data management (DM) has become a core activity. Also, external pressure is rising on researchers in general to make sure their experiments are reproducible and that the resulting data is accessible and reusable for others for a longer time (“data stewardship”, DS). This pressure puts even higher demands on the data management practice. Data management and stewardship plans will be a prerequisite for most (public) funding soon. However, data management and data stewardship are not everyday practice for researchers and they are considered more of an administrative task rather than a contribution to proper research. The goal of this implementation study is to kick-start coherent DM/DS activities in ELIXIR and formulate and implement first solutions for good DM/DS in ELIXIR. Currently, there are two main activities in this project, namely to develop and deliver training in DM/DS, as well as to build an infrastructure component (portal or wizard) to support good DM/DS. These two parts will use each other’s results but be executed as separate and complementary projects. More investments are needed after this period to reach a broader audience and feedback experience. DM/DS methods particularly for larger research projects for instance require more structural planning and are not in the scope of this Implementation Study. The two main target audiences for both of these activities are life science researchers who have to make DS plans on the one hand, and data stewards, curators, data managers and other experts in data handling on the other hand. In addition, members of these audiences who are involved in ELIXIR will be asked to actively contribute and help assemble and review the information for the training events, as well as the content of the portal. |
ELIXIR Netherlands, ELIXIR Czech Republic, ELIXIR Luxembourg, ELIXIR Switzerland, ELIXIR Slovenia, ELIXIR UK, ELIXIR Estonia, ELIXIR Portugal, ELIXIR France, ELIXIR Norway, EMBL-EBI, ELIXIR Sweden, ELIXIR Belgium |
Towards Data Stewardship in ELIXIR: Training and Portal
|
Scientists have been managing data ever since they collected specimens and shared results of their study with their peers. The advent of the digital computer has allowed for data acquisition in unprecedented amounts to the extent that the organisational task of data management (DM) has become a core activity. Also, external pressure is rising on researchers in general to make sure their experiments are reproducible and that the resulting data is accessible and reusable for others for a longer time (“data stewardship”, DS). This pressure puts even higher demands on the data management practice. Data management and stewardship plans will be a prerequisite for most (public) funding soon. However, data management and data stewardship are not everyday practice for researchers and they are considered more of an administrative task rather than a contribution to proper research. The goal of this implementation study is to kick-start coherent DM/DS activities in ELIXIR and formulate and implement first solutions for good DM/DS in ELIXIR. Currently, there are two main activities in this project, namely to develop and deliver training in DM/DS, as well as to build an infrastructure component (portal or wizard) to support good DM/DS. These two parts will use each other’s results but be executed as separate and complementary projects. More investments are needed after this period to reach a broader audience and feedback experience. DM/DS methods particularly for larger research projects for instance require more structural planning and are not in the scope of this Implementation Study. The two main target audiences for both of these activities are life science researchers who have to make DS plans on the one hand, and data stewards, curators, data managers and other experts in data handling on the other hand. In addition, members of these audiences who are involved in ELIXIR will be asked to actively contribute and help assemble and review the information for the training events, as well as the content of the portal. |
ELIXIR Netherlands, ELIXIR Czech Republic, ELIXIR Luxembourg, ELIXIR Switzerland, ELIXIR Slovenia, ELIXIR UK, ELIXIR Estonia, ELIXIR Portugal, ELIXIR France, ELIXIR Norway, EMBL-EBI, ELIXIR Sweden, ELIXIR Belgium |
Towards Data Stewardship in ELIXIR: Training and Portal
|
Scientists have been managing data ever since they collected specimens and shared results of their study with their peers. The advent of the digital computer has allowed for data acquisition in unprecedented amounts to the extent that the organisational task of data management (DM) has become a core activity. Also, external pressure is rising on researchers in general to make sure their experiments are reproducible and that the resulting data is accessible and reusable for others for a longer time (“data stewardship”, DS). This pressure puts even higher demands on the data management practice. Data management and stewardship plans will be a prerequisite for most (public) funding soon. However, data management and data stewardship are not everyday practice for researchers and they are considered more of an administrative task rather than a contribution to proper research. The goal of this implementation study is to kick-start coherent DM/DS activities in ELIXIR and formulate and implement first solutions for good DM/DS in ELIXIR. Currently, there are two main activities in this project, namely to develop and deliver training in DM/DS, as well as to build an infrastructure component (portal or wizard) to support good DM/DS. These two parts will use each other’s results but be executed as separate and complementary projects. More investments are needed after this period to reach a broader audience and feedback experience. DM/DS methods particularly for larger research projects for instance require more structural planning and are not in the scope of this Implementation Study. The two main target audiences for both of these activities are life science researchers who have to make DS plans on the one hand, and data stewards, curators, data managers and other experts in data handling on the other hand. In addition, members of these audiences who are involved in ELIXIR will be asked to actively contribute and help assemble and review the information for the training events, as well as the content of the portal. |
ELIXIR Netherlands, ELIXIR Czech Republic, ELIXIR Luxembourg, ELIXIR Switzerland, ELIXIR Slovenia, ELIXIR UK, ELIXIR Estonia, ELIXIR Portugal, ELIXIR France, ELIXIR Norway, EMBL-EBI, ELIXIR Sweden, ELIXIR Belgium |
Towards Data Stewardship in ELIXIR: Training and Portal
|
Scientists have been managing data ever since they collected specimens and shared results of their study with their peers. The advent of the digital computer has allowed for data acquisition in unprecedented amounts to the extent that the organisational task of data management (DM) has become a core activity. Also, external pressure is rising on researchers in general to make sure their experiments are reproducible and that the resulting data is accessible and reusable for others for a longer time (“data stewardship”, DS). This pressure puts even higher demands on the data management practice. Data management and stewardship plans will be a prerequisite for most (public) funding soon. However, data management and data stewardship are not everyday practice for researchers and they are considered more of an administrative task rather than a contribution to proper research. The goal of this implementation study is to kick-start coherent DM/DS activities in ELIXIR and formulate and implement first solutions for good DM/DS in ELIXIR. Currently, there are two main activities in this project, namely to develop and deliver training in DM/DS, as well as to build an infrastructure component (portal or wizard) to support good DM/DS. These two parts will use each other’s results but be executed as separate and complementary projects. More investments are needed after this period to reach a broader audience and feedback experience. DM/DS methods particularly for larger research projects for instance require more structural planning and are not in the scope of this Implementation Study. The two main target audiences for both of these activities are life science researchers who have to make DS plans on the one hand, and data stewards, curators, data managers and other experts in data handling on the other hand. In addition, members of these audiences who are involved in ELIXIR will be asked to actively contribute and help assemble and review the information for the training events, as well as the content of the portal. |
ELIXIR Netherlands, ELIXIR Czech Republic, ELIXIR Luxembourg, ELIXIR Switzerland, ELIXIR Slovenia, ELIXIR UK, ELIXIR Estonia, ELIXIR Portugal, ELIXIR France, ELIXIR Norway, EMBL-EBI, ELIXIR Sweden, ELIXIR Belgium |
Towards Data Stewardship in ELIXIR: Training and Portal
|
Scientists have been managing data ever since they collected specimens and shared results of their study with their peers. The advent of the digital computer has allowed for data acquisition in unprecedented amounts to the extent that the organisational task of data management (DM) has become a core activity. Also, external pressure is rising on researchers in general to make sure their experiments are reproducible and that the resulting data is accessible and reusable for others for a longer time (“data stewardship”, DS). This pressure puts even higher demands on the data management practice. Data management and stewardship plans will be a prerequisite for most (public) funding soon. However, data management and data stewardship are not everyday practice for researchers and they are considered more of an administrative task rather than a contribution to proper research. The goal of this implementation study is to kick-start coherent DM/DS activities in ELIXIR and formulate and implement first solutions for good DM/DS in ELIXIR. Currently, there are two main activities in this project, namely to develop and deliver training in DM/DS, as well as to build an infrastructure component (portal or wizard) to support good DM/DS. These two parts will use each other’s results but be executed as separate and complementary projects. More investments are needed after this period to reach a broader audience and feedback experience. DM/DS methods particularly for larger research projects for instance require more structural planning and are not in the scope of this Implementation Study. The two main target audiences for both of these activities are life science researchers who have to make DS plans on the one hand, and data stewards, curators, data managers and other experts in data handling on the other hand. In addition, members of these audiences who are involved in ELIXIR will be asked to actively contribute and help assemble and review the information for the training events, as well as the content of the portal. |
ELIXIR Netherlands, ELIXIR Czech Republic, ELIXIR Luxembourg, ELIXIR Switzerland, ELIXIR Slovenia, ELIXIR UK, ELIXIR Estonia, ELIXIR Portugal, ELIXIR France, ELIXIR Norway, EMBL-EBI, ELIXIR Sweden, ELIXIR Belgium |
Training Capacity Building
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This study aims to empower the expanding ELIXIR network, supporting members in growing their capacities is necessary in order to maintain the quality of ELIXIR training, services and resources. The Training Platform will continue to expand the Train-the-Trainer (TtT) framework (developed under EXCELERATE) to increase the skills of ELIXIR trainers as well as their number across Nodes. WP1 - Train the trainer
WP2 - Management and operationsA gap analysis will be undertaken in 2019 to assess the needs in training of management and operations across Nodes. A working group will be formed to design and implement this analysis, with suitable training resources on management and operations being made available through TeSS. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR Spain, ELIXIR Greece, ELIXIR Hungary, ELIXIR Israel, ELIXIR Luxembourg, ELIXIR Norway |
Training Capacity Building
|
This study aims to empower the expanding ELIXIR network, supporting members in growing their capacities is necessary in order to maintain the quality of ELIXIR training, services and resources. The Training Platform will continue to expand the Train-the-Trainer (TtT) framework (developed under EXCELERATE) to increase the skills of ELIXIR trainers as well as their number across Nodes. WP1 - Train the trainer
WP2 - Management and operationsA gap analysis will be undertaken in 2019 to assess the needs in training of management and operations across Nodes. A working group will be formed to design and implement this analysis, with suitable training resources on management and operations being made available through TeSS. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR Spain, ELIXIR Greece, ELIXIR Hungary, ELIXIR Israel, ELIXIR Luxembourg, ELIXIR Norway |
Training Capacity Building
|
This study aims to empower the expanding ELIXIR network, supporting members in growing their capacities is necessary in order to maintain the quality of ELIXIR training, services and resources. The Training Platform will continue to expand the Train-the-Trainer (TtT) framework (developed under EXCELERATE) to increase the skills of ELIXIR trainers as well as their number across Nodes. WP1 - Train the trainer
WP2 - Management and operationsA gap analysis will be undertaken in 2019 to assess the needs in training of management and operations across Nodes. A working group will be formed to design and implement this analysis, with suitable training resources on management and operations being made available through TeSS. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR Spain, ELIXIR Greece, ELIXIR Hungary, ELIXIR Israel, ELIXIR Luxembourg, ELIXIR Norway |
Training Capacity Building
|
This study aims to empower the expanding ELIXIR network, supporting members in growing their capacities is necessary in order to maintain the quality of ELIXIR training, services and resources. The Training Platform will continue to expand the Train-the-Trainer (TtT) framework (developed under EXCELERATE) to increase the skills of ELIXIR trainers as well as their number across Nodes. WP1 - Train the trainer
WP2 - Management and operationsA gap analysis will be undertaken in 2019 to assess the needs in training of management and operations across Nodes. A working group will be formed to design and implement this analysis, with suitable training resources on management and operations being made available through TeSS. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR Spain, ELIXIR Greece, ELIXIR Hungary, ELIXIR Israel, ELIXIR Luxembourg, ELIXIR Norway |
Training Capacity Building
|
This study aims to empower the expanding ELIXIR network, supporting members in growing their capacities is necessary in order to maintain the quality of ELIXIR training, services and resources. The Training Platform will continue to expand the Train-the-Trainer (TtT) framework (developed under EXCELERATE) to increase the skills of ELIXIR trainers as well as their number across Nodes. WP1 - Train the trainer
WP2 - Management and operationsA gap analysis will be undertaken in 2019 to assess the needs in training of management and operations across Nodes. A working group will be formed to design and implement this analysis, with suitable training resources on management and operations being made available through TeSS. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR Spain, ELIXIR Greece, ELIXIR Hungary, ELIXIR Israel, ELIXIR Luxembourg, ELIXIR Norway |
Training Capacity Building
|
This study aims to empower the expanding ELIXIR network, supporting members in growing their capacities is necessary in order to maintain the quality of ELIXIR training, services and resources. The Training Platform will continue to expand the Train-the-Trainer (TtT) framework (developed under EXCELERATE) to increase the skills of ELIXIR trainers as well as their number across Nodes. WP1 - Train the trainer
WP2 - Management and operationsA gap analysis will be undertaken in 2019 to assess the needs in training of management and operations across Nodes. A working group will be formed to design and implement this analysis, with suitable training resources on management and operations being made available through TeSS. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR Spain, ELIXIR Greece, ELIXIR Hungary, ELIXIR Israel, ELIXIR Luxembourg, ELIXIR Norway |
Training Capacity Building
|
This study aims to empower the expanding ELIXIR network, supporting members in growing their capacities is necessary in order to maintain the quality of ELIXIR training, services and resources. The Training Platform will continue to expand the Train-the-Trainer (TtT) framework (developed under EXCELERATE) to increase the skills of ELIXIR trainers as well as their number across Nodes. WP1 - Train the trainer
WP2 - Management and operationsA gap analysis will be undertaken in 2019 to assess the needs in training of management and operations across Nodes. A working group will be formed to design and implement this analysis, with suitable training resources on management and operations being made available through TeSS. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR Spain, ELIXIR Greece, ELIXIR Hungary, ELIXIR Israel, ELIXIR Luxembourg, ELIXIR Norway |
Training Capacity Building
|
This study aims to empower the expanding ELIXIR network, supporting members in growing their capacities is necessary in order to maintain the quality of ELIXIR training, services and resources. The Training Platform will continue to expand the Train-the-Trainer (TtT) framework (developed under EXCELERATE) to increase the skills of ELIXIR trainers as well as their number across Nodes. WP1 - Train the trainer
WP2 - Management and operationsA gap analysis will be undertaken in 2019 to assess the needs in training of management and operations across Nodes. A working group will be formed to design and implement this analysis, with suitable training resources on management and operations being made available through TeSS. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR Spain, ELIXIR Greece, ELIXIR Hungary, ELIXIR Israel, ELIXIR Luxembourg, ELIXIR Norway |
Training Capacity Building
|
This study aims to empower the expanding ELIXIR network, supporting members in growing their capacities is necessary in order to maintain the quality of ELIXIR training, services and resources. The Training Platform will continue to expand the Train-the-Trainer (TtT) framework (developed under EXCELERATE) to increase the skills of ELIXIR trainers as well as their number across Nodes. WP1 - Train the trainer
WP2 - Management and operationsA gap analysis will be undertaken in 2019 to assess the needs in training of management and operations across Nodes. A working group will be formed to design and implement this analysis, with suitable training resources on management and operations being made available through TeSS. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR Spain, ELIXIR Greece, ELIXIR Hungary, ELIXIR Israel, ELIXIR Luxembourg, ELIXIR Norway |
Training Capacity Building
|
This study aims to empower the expanding ELIXIR network, supporting members in growing their capacities is necessary in order to maintain the quality of ELIXIR training, services and resources. The Training Platform will continue to expand the Train-the-Trainer (TtT) framework (developed under EXCELERATE) to increase the skills of ELIXIR trainers as well as their number across Nodes. WP1 - Train the trainer
WP2 - Management and operationsA gap analysis will be undertaken in 2019 to assess the needs in training of management and operations across Nodes. A working group will be formed to design and implement this analysis, with suitable training resources on management and operations being made available through TeSS. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR Spain, ELIXIR Greece, ELIXIR Hungary, ELIXIR Israel, ELIXIR Luxembourg, ELIXIR Norway |
Training Capacity Building
|
This study aims to empower the expanding ELIXIR network, supporting members in growing their capacities is necessary in order to maintain the quality of ELIXIR training, services and resources. The Training Platform will continue to expand the Train-the-Trainer (TtT) framework (developed under EXCELERATE) to increase the skills of ELIXIR trainers as well as their number across Nodes. WP1 - Train the trainer
WP2 - Management and operationsA gap analysis will be undertaken in 2019 to assess the needs in training of management and operations across Nodes. A working group will be formed to design and implement this analysis, with suitable training resources on management and operations being made available through TeSS. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR Spain, ELIXIR Greece, ELIXIR Hungary, ELIXIR Israel, ELIXIR Luxembourg, ELIXIR Norway |
Training Capacity Building
|
This study aims to empower the expanding ELIXIR network, supporting members in growing their capacities is necessary in order to maintain the quality of ELIXIR training, services and resources. The Training Platform will continue to expand the Train-the-Trainer (TtT) framework (developed under EXCELERATE) to increase the skills of ELIXIR trainers as well as their number across Nodes. WP1 - Train the trainer
WP2 - Management and operationsA gap analysis will be undertaken in 2019 to assess the needs in training of management and operations across Nodes. A working group will be formed to design and implement this analysis, with suitable training resources on management and operations being made available through TeSS. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Portugal, ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR Spain, ELIXIR Greece, ELIXIR Hungary, ELIXIR Israel, ELIXIR Luxembourg, ELIXIR Norway |
Training Capacity Building (2022-23)
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Capitalizing on the outcomes of the Work Programme 2019-2021, we continue to support the ELIXIR members to grow their skills and capacities in order to maintain the quality of ELIXIR training, services and resources. The TP continues to expand the Train-the-Trainer (TtT) framework, to increase the skills of ELIXIR trainers as well as their number across Nodes. The Node’s capacity in management and operations will be developed through specific actions aligned with the results of the gap analysis previously performed in the 2019-2021 Work Plan. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR UK, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Germany, EMBL-EBI, ELIXIR Greece |
Training Capacity Building (2022-23)
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Capitalizing on the outcomes of the Work Programme 2019-2021, we continue to support the ELIXIR members to grow their skills and capacities in order to maintain the quality of ELIXIR training, services and resources. The TP continues to expand the Train-the-Trainer (TtT) framework, to increase the skills of ELIXIR trainers as well as their number across Nodes. The Node’s capacity in management and operations will be developed through specific actions aligned with the results of the gap analysis previously performed in the 2019-2021 Work Plan. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR UK, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Germany, EMBL-EBI, ELIXIR Greece |
Training Capacity Building (2022-23)
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Capitalizing on the outcomes of the Work Programme 2019-2021, we continue to support the ELIXIR members to grow their skills and capacities in order to maintain the quality of ELIXIR training, services and resources. The TP continues to expand the Train-the-Trainer (TtT) framework, to increase the skills of ELIXIR trainers as well as their number across Nodes. The Node’s capacity in management and operations will be developed through specific actions aligned with the results of the gap analysis previously performed in the 2019-2021 Work Plan. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR UK, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Germany, EMBL-EBI, ELIXIR Greece |
Training Capacity Building (2022-23)
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Capitalizing on the outcomes of the Work Programme 2019-2021, we continue to support the ELIXIR members to grow their skills and capacities in order to maintain the quality of ELIXIR training, services and resources. The TP continues to expand the Train-the-Trainer (TtT) framework, to increase the skills of ELIXIR trainers as well as their number across Nodes. The Node’s capacity in management and operations will be developed through specific actions aligned with the results of the gap analysis previously performed in the 2019-2021 Work Plan. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR UK, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Germany, EMBL-EBI, ELIXIR Greece |
Training Capacity Building (2022-23)
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Capitalizing on the outcomes of the Work Programme 2019-2021, we continue to support the ELIXIR members to grow their skills and capacities in order to maintain the quality of ELIXIR training, services and resources. The TP continues to expand the Train-the-Trainer (TtT) framework, to increase the skills of ELIXIR trainers as well as their number across Nodes. The Node’s capacity in management and operations will be developed through specific actions aligned with the results of the gap analysis previously performed in the 2019-2021 Work Plan. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR UK, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Germany, EMBL-EBI, ELIXIR Greece |
Training Capacity Building (2022-23)
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Capitalizing on the outcomes of the Work Programme 2019-2021, we continue to support the ELIXIR members to grow their skills and capacities in order to maintain the quality of ELIXIR training, services and resources. The TP continues to expand the Train-the-Trainer (TtT) framework, to increase the skills of ELIXIR trainers as well as their number across Nodes. The Node’s capacity in management and operations will be developed through specific actions aligned with the results of the gap analysis previously performed in the 2019-2021 Work Plan. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR UK, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Germany, EMBL-EBI, ELIXIR Greece |
Training Capacity Building (2022-23)
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Capitalizing on the outcomes of the Work Programme 2019-2021, we continue to support the ELIXIR members to grow their skills and capacities in order to maintain the quality of ELIXIR training, services and resources. The TP continues to expand the Train-the-Trainer (TtT) framework, to increase the skills of ELIXIR trainers as well as their number across Nodes. The Node’s capacity in management and operations will be developed through specific actions aligned with the results of the gap analysis previously performed in the 2019-2021 Work Plan. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR UK, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Germany, EMBL-EBI, ELIXIR Greece |
Training Capacity Building (2022-23)
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Capitalizing on the outcomes of the Work Programme 2019-2021, we continue to support the ELIXIR members to grow their skills and capacities in order to maintain the quality of ELIXIR training, services and resources. The TP continues to expand the Train-the-Trainer (TtT) framework, to increase the skills of ELIXIR trainers as well as their number across Nodes. The Node’s capacity in management and operations will be developed through specific actions aligned with the results of the gap analysis previously performed in the 2019-2021 Work Plan. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR UK, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Germany, EMBL-EBI, ELIXIR Greece |
Training Capacity Building (2022-23)
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Capitalizing on the outcomes of the Work Programme 2019-2021, we continue to support the ELIXIR members to grow their skills and capacities in order to maintain the quality of ELIXIR training, services and resources. The TP continues to expand the Train-the-Trainer (TtT) framework, to increase the skills of ELIXIR trainers as well as their number across Nodes. The Node’s capacity in management and operations will be developed through specific actions aligned with the results of the gap analysis previously performed in the 2019-2021 Work Plan. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR UK, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Germany, EMBL-EBI, ELIXIR Greece |
Training Capacity Building (2022-23)
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Capitalizing on the outcomes of the Work Programme 2019-2021, we continue to support the ELIXIR members to grow their skills and capacities in order to maintain the quality of ELIXIR training, services and resources. The TP continues to expand the Train-the-Trainer (TtT) framework, to increase the skills of ELIXIR trainers as well as their number across Nodes. The Node’s capacity in management and operations will be developed through specific actions aligned with the results of the gap analysis previously performed in the 2019-2021 Work Plan. |
ELIXIR Italy, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR UK, ELIXIR Slovenia, ELIXIR Sweden, ELIXIR Portugal, ELIXIR Germany, EMBL-EBI, ELIXIR Greece |
Training Technical Infrastructure – TeSS
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The focus of this task is TeSS, the ELIXIR Training Platform’s flagship resource and key reference training portal for the ELIXIR community. This is the principal channel of communication and aggregator of information about ELIXIR training events. TeSS began as an ELIXIR-UK pilot project prior to EXCELERATE, and has matured during EXCELERATE. As of July 2018, TeSS had displayed more than 8,000 training events, with a monthly average of at least 200 upcoming events; in addition, TeSS currently holds more than 1,000 training materials, aggregated from 51 training providers, of which 13 are ELIXIR Nodes. In the last three years, TeSS has been visited by around 13,000 unique users across Europe and beyond. This task has four main objectives:
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ELIXIR UK, ELIXIR Belgium , ELIXIR Spain, ELIXIR Switzerland, ELIXIR Denmark, ELIXIR Slovenia, ELIXIR France, EMBL-EBI, ELIXIR Israel, ELIXIR Netherlands |
Training Technical Infrastructure – TeSS
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The focus of this task is TeSS, the ELIXIR Training Platform’s flagship resource and key reference training portal for the ELIXIR community. This is the principal channel of communication and aggregator of information about ELIXIR training events. TeSS began as an ELIXIR-UK pilot project prior to EXCELERATE, and has matured during EXCELERATE. As of July 2018, TeSS had displayed more than 8,000 training events, with a monthly average of at least 200 upcoming events; in addition, TeSS currently holds more than 1,000 training materials, aggregated from 51 training providers, of which 13 are ELIXIR Nodes. In the last three years, TeSS has been visited by around 13,000 unique users across Europe and beyond. This task has four main objectives:
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ELIXIR UK, ELIXIR Belgium , ELIXIR Spain, ELIXIR Switzerland, ELIXIR Denmark, ELIXIR Slovenia, ELIXIR France, EMBL-EBI, ELIXIR Israel, ELIXIR Netherlands |
Training Technical Infrastructure – TeSS
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The focus of this task is TeSS, the ELIXIR Training Platform’s flagship resource and key reference training portal for the ELIXIR community. This is the principal channel of communication and aggregator of information about ELIXIR training events. TeSS began as an ELIXIR-UK pilot project prior to EXCELERATE, and has matured during EXCELERATE. As of July 2018, TeSS had displayed more than 8,000 training events, with a monthly average of at least 200 upcoming events; in addition, TeSS currently holds more than 1,000 training materials, aggregated from 51 training providers, of which 13 are ELIXIR Nodes. In the last three years, TeSS has been visited by around 13,000 unique users across Europe and beyond. This task has four main objectives:
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ELIXIR UK, ELIXIR Belgium , ELIXIR Spain, ELIXIR Switzerland, ELIXIR Denmark, ELIXIR Slovenia, ELIXIR France, EMBL-EBI, ELIXIR Israel, ELIXIR Netherlands |
Training Technical Infrastructure – TeSS
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The focus of this task is TeSS, the ELIXIR Training Platform’s flagship resource and key reference training portal for the ELIXIR community. This is the principal channel of communication and aggregator of information about ELIXIR training events. TeSS began as an ELIXIR-UK pilot project prior to EXCELERATE, and has matured during EXCELERATE. As of July 2018, TeSS had displayed more than 8,000 training events, with a monthly average of at least 200 upcoming events; in addition, TeSS currently holds more than 1,000 training materials, aggregated from 51 training providers, of which 13 are ELIXIR Nodes. In the last three years, TeSS has been visited by around 13,000 unique users across Europe and beyond. This task has four main objectives:
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ELIXIR UK, ELIXIR Belgium , ELIXIR Spain, ELIXIR Switzerland, ELIXIR Denmark, ELIXIR Slovenia, ELIXIR France, EMBL-EBI, ELIXIR Israel, ELIXIR Netherlands |
Training Technical Infrastructure – TeSS
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The focus of this task is TeSS, the ELIXIR Training Platform’s flagship resource and key reference training portal for the ELIXIR community. This is the principal channel of communication and aggregator of information about ELIXIR training events. TeSS began as an ELIXIR-UK pilot project prior to EXCELERATE, and has matured during EXCELERATE. As of July 2018, TeSS had displayed more than 8,000 training events, with a monthly average of at least 200 upcoming events; in addition, TeSS currently holds more than 1,000 training materials, aggregated from 51 training providers, of which 13 are ELIXIR Nodes. In the last three years, TeSS has been visited by around 13,000 unique users across Europe and beyond. This task has four main objectives:
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ELIXIR UK, ELIXIR Belgium , ELIXIR Spain, ELIXIR Switzerland, ELIXIR Denmark, ELIXIR Slovenia, ELIXIR France, EMBL-EBI, ELIXIR Israel, ELIXIR Netherlands |
Training Technical Infrastructure – TeSS
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The focus of this task is TeSS, the ELIXIR Training Platform’s flagship resource and key reference training portal for the ELIXIR community. This is the principal channel of communication and aggregator of information about ELIXIR training events. TeSS began as an ELIXIR-UK pilot project prior to EXCELERATE, and has matured during EXCELERATE. As of July 2018, TeSS had displayed more than 8,000 training events, with a monthly average of at least 200 upcoming events; in addition, TeSS currently holds more than 1,000 training materials, aggregated from 51 training providers, of which 13 are ELIXIR Nodes. In the last three years, TeSS has been visited by around 13,000 unique users across Europe and beyond. This task has four main objectives:
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ELIXIR UK, ELIXIR Belgium , ELIXIR Spain, ELIXIR Switzerland, ELIXIR Denmark, ELIXIR Slovenia, ELIXIR France, EMBL-EBI, ELIXIR Israel, ELIXIR Netherlands |
Training Technical Infrastructure – TeSS
|
The focus of this task is TeSS, the ELIXIR Training Platform’s flagship resource and key reference training portal for the ELIXIR community. This is the principal channel of communication and aggregator of information about ELIXIR training events. TeSS began as an ELIXIR-UK pilot project prior to EXCELERATE, and has matured during EXCELERATE. As of July 2018, TeSS had displayed more than 8,000 training events, with a monthly average of at least 200 upcoming events; in addition, TeSS currently holds more than 1,000 training materials, aggregated from 51 training providers, of which 13 are ELIXIR Nodes. In the last three years, TeSS has been visited by around 13,000 unique users across Europe and beyond. This task has four main objectives:
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ELIXIR UK, ELIXIR Belgium , ELIXIR Spain, ELIXIR Switzerland, ELIXIR Denmark, ELIXIR Slovenia, ELIXIR France, EMBL-EBI, ELIXIR Israel, ELIXIR Netherlands |
Training Technical Infrastructure – TeSS
|
The focus of this task is TeSS, the ELIXIR Training Platform’s flagship resource and key reference training portal for the ELIXIR community. This is the principal channel of communication and aggregator of information about ELIXIR training events. TeSS began as an ELIXIR-UK pilot project prior to EXCELERATE, and has matured during EXCELERATE. As of July 2018, TeSS had displayed more than 8,000 training events, with a monthly average of at least 200 upcoming events; in addition, TeSS currently holds more than 1,000 training materials, aggregated from 51 training providers, of which 13 are ELIXIR Nodes. In the last three years, TeSS has been visited by around 13,000 unique users across Europe and beyond. This task has four main objectives:
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ELIXIR UK, ELIXIR Belgium , ELIXIR Spain, ELIXIR Switzerland, ELIXIR Denmark, ELIXIR Slovenia, ELIXIR France, EMBL-EBI, ELIXIR Israel, ELIXIR Netherlands |
Training Technical Infrastructure – TeSS
|
The focus of this task is TeSS, the ELIXIR Training Platform’s flagship resource and key reference training portal for the ELIXIR community. This is the principal channel of communication and aggregator of information about ELIXIR training events. TeSS began as an ELIXIR-UK pilot project prior to EXCELERATE, and has matured during EXCELERATE. As of July 2018, TeSS had displayed more than 8,000 training events, with a monthly average of at least 200 upcoming events; in addition, TeSS currently holds more than 1,000 training materials, aggregated from 51 training providers, of which 13 are ELIXIR Nodes. In the last three years, TeSS has been visited by around 13,000 unique users across Europe and beyond. This task has four main objectives:
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ELIXIR UK, ELIXIR Belgium , ELIXIR Spain, ELIXIR Switzerland, ELIXIR Denmark, ELIXIR Slovenia, ELIXIR France, EMBL-EBI, ELIXIR Israel, ELIXIR Netherlands |
Training Technical Infrastructure – TeSS
|
The focus of this task is TeSS, the ELIXIR Training Platform’s flagship resource and key reference training portal for the ELIXIR community. This is the principal channel of communication and aggregator of information about ELIXIR training events. TeSS began as an ELIXIR-UK pilot project prior to EXCELERATE, and has matured during EXCELERATE. As of July 2018, TeSS had displayed more than 8,000 training events, with a monthly average of at least 200 upcoming events; in addition, TeSS currently holds more than 1,000 training materials, aggregated from 51 training providers, of which 13 are ELIXIR Nodes. In the last three years, TeSS has been visited by around 13,000 unique users across Europe and beyond. This task has four main objectives:
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ELIXIR UK, ELIXIR Belgium , ELIXIR Spain, ELIXIR Switzerland, ELIXIR Denmark, ELIXIR Slovenia, ELIXIR France, EMBL-EBI, ELIXIR Israel, ELIXIR Netherlands |
Training Toolkit
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This study will build on the EXCELERATE (WP11) training grant. WP1: Publication and adoption of the ELIXIR Training toolkitThis Work Package will draft a Training Handbook detailing all of the materials developed so far, aiming to provide a comprehensive reference resource for developing training capacity.
WP2: Toolkit expansion – Impact assessmentThis Work Package will tailor the strategy and core metrics developed through EXCELERATE to also measure the impact that training is having on ELIXIR Services, Platforms and Communities through
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ELIXIR UK, ELIXIR Spain, EMBL-EBI |
Training Toolkit
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This study will build on the EXCELERATE (WP11) training grant. WP1: Publication and adoption of the ELIXIR Training toolkitThis Work Package will draft a Training Handbook detailing all of the materials developed so far, aiming to provide a comprehensive reference resource for developing training capacity.
WP2: Toolkit expansion – Impact assessmentThis Work Package will tailor the strategy and core metrics developed through EXCELERATE to also measure the impact that training is having on ELIXIR Services, Platforms and Communities through
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ELIXIR UK, ELIXIR Spain, EMBL-EBI |
Training Toolkit
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This study will build on the EXCELERATE (WP11) training grant. WP1: Publication and adoption of the ELIXIR Training toolkitThis Work Package will draft a Training Handbook detailing all of the materials developed so far, aiming to provide a comprehensive reference resource for developing training capacity.
WP2: Toolkit expansion – Impact assessmentThis Work Package will tailor the strategy and core metrics developed through EXCELERATE to also measure the impact that training is having on ELIXIR Services, Platforms and Communities through
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ELIXIR UK, ELIXIR Spain, EMBL-EBI |
Training Toolkit (2022-23)
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The ELIXIR Training Platform has developed a series of training best practices and guidelines, covering several aspects of training development and delivery. These practices are the building blocks of the ‘ELIXIR Training Toolkit’, a collection of resources available in the ELIXIR website. The toolkit will be maintained and updated during this task as well as disseminated to the ELIXIR community for its adoption. |
ELIXIR Spain, ELIXIR UK, ELIXIR Italy, ELIXIR Norway, ELIXIR Sweden, EMBL-EBI |
Training Toolkit (2022-23)
|
The ELIXIR Training Platform has developed a series of training best practices and guidelines, covering several aspects of training development and delivery. These practices are the building blocks of the ‘ELIXIR Training Toolkit’, a collection of resources available in the ELIXIR website. The toolkit will be maintained and updated during this task as well as disseminated to the ELIXIR community for its adoption. |
ELIXIR Spain, ELIXIR UK, ELIXIR Italy, ELIXIR Norway, ELIXIR Sweden, EMBL-EBI |
Training Toolkit (2022-23)
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The ELIXIR Training Platform has developed a series of training best practices and guidelines, covering several aspects of training development and delivery. These practices are the building blocks of the ‘ELIXIR Training Toolkit’, a collection of resources available in the ELIXIR website. The toolkit will be maintained and updated during this task as well as disseminated to the ELIXIR community for its adoption. |
ELIXIR Spain, ELIXIR UK, ELIXIR Italy, ELIXIR Norway, ELIXIR Sweden, EMBL-EBI |
Training Toolkit (2022-23)
|
The ELIXIR Training Platform has developed a series of training best practices and guidelines, covering several aspects of training development and delivery. These practices are the building blocks of the ‘ELIXIR Training Toolkit’, a collection of resources available in the ELIXIR website. The toolkit will be maintained and updated during this task as well as disseminated to the ELIXIR community for its adoption. |
ELIXIR Spain, ELIXIR UK, ELIXIR Italy, ELIXIR Norway, ELIXIR Sweden, EMBL-EBI |
Training Toolkit (2022-23)
|
The ELIXIR Training Platform has developed a series of training best practices and guidelines, covering several aspects of training development and delivery. These practices are the building blocks of the ‘ELIXIR Training Toolkit’, a collection of resources available in the ELIXIR website. The toolkit will be maintained and updated during this task as well as disseminated to the ELIXIR community for its adoption. |
ELIXIR Spain, ELIXIR UK, ELIXIR Italy, ELIXIR Norway, ELIXIR Sweden, EMBL-EBI |
Training Toolkit (2022-23)
|
The ELIXIR Training Platform has developed a series of training best practices and guidelines, covering several aspects of training development and delivery. These practices are the building blocks of the ‘ELIXIR Training Toolkit’, a collection of resources available in the ELIXIR website. The toolkit will be maintained and updated during this task as well as disseminated to the ELIXIR community for its adoption. |
ELIXIR Spain, ELIXIR UK, ELIXIR Italy, ELIXIR Norway, ELIXIR Sweden, EMBL-EBI |
Using clouds and VMs for bioinformatics training
|
Bioinformatics analysis typically involves a large number of software and reference data, making the installation process a time-consuming task. This problem is aggravated in a course setting, where every participant needs to have an identical installation, sufficient hardware to run it, and, ideally, access to an identical set-up after the course. Ready-to-run virtual machine (VM) images containing an operating system and pre-installed analysis software, as well as containers, are gaining momentum in bioinformatics. These images and containers can be run on cloud platforms, which allows easy scaling for running tens or hundreds of simultaneous jobs in a course setting. Several ELIXIR Nodes already provide cloud resources for national use. In order to enable also other Nodes to use cloud for training, it is necessary to investigate which of these cloud providers would be willing to provide cloud resources for international use in a sustainable manner. As cloud, VMs and containers are new topics to many bioinformatics trainers, it is important that technical help is available. ELIXIR needs to have a streamlined process for requesting cloud resources and technical help, so that a suitable cloud is found promptly for a course and there is a clear mechanism for reimbursing the technical personnel and computing resource costs for the provider. This study is now complete, the final report and other documents will be added as they are available. |
ELIXIR Finland, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR France, ELIXIR UK, ELIXIR Belgium , ELIXIR Spain, ELIXIR Slovenia, ELIXIR Germany |
Using clouds and VMs for bioinformatics training
|
Bioinformatics analysis typically involves a large number of software and reference data, making the installation process a time-consuming task. This problem is aggravated in a course setting, where every participant needs to have an identical installation, sufficient hardware to run it, and, ideally, access to an identical set-up after the course. Ready-to-run virtual machine (VM) images containing an operating system and pre-installed analysis software, as well as containers, are gaining momentum in bioinformatics. These images and containers can be run on cloud platforms, which allows easy scaling for running tens or hundreds of simultaneous jobs in a course setting. Several ELIXIR Nodes already provide cloud resources for national use. In order to enable also other Nodes to use cloud for training, it is necessary to investigate which of these cloud providers would be willing to provide cloud resources for international use in a sustainable manner. As cloud, VMs and containers are new topics to many bioinformatics trainers, it is important that technical help is available. ELIXIR needs to have a streamlined process for requesting cloud resources and technical help, so that a suitable cloud is found promptly for a course and there is a clear mechanism for reimbursing the technical personnel and computing resource costs for the provider. This study is now complete, the final report and other documents will be added as they are available. |
ELIXIR Finland, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR France, ELIXIR UK, ELIXIR Belgium , ELIXIR Spain, ELIXIR Slovenia, ELIXIR Germany |
Using clouds and VMs for bioinformatics training
|
Bioinformatics analysis typically involves a large number of software and reference data, making the installation process a time-consuming task. This problem is aggravated in a course setting, where every participant needs to have an identical installation, sufficient hardware to run it, and, ideally, access to an identical set-up after the course. Ready-to-run virtual machine (VM) images containing an operating system and pre-installed analysis software, as well as containers, are gaining momentum in bioinformatics. These images and containers can be run on cloud platforms, which allows easy scaling for running tens or hundreds of simultaneous jobs in a course setting. Several ELIXIR Nodes already provide cloud resources for national use. In order to enable also other Nodes to use cloud for training, it is necessary to investigate which of these cloud providers would be willing to provide cloud resources for international use in a sustainable manner. As cloud, VMs and containers are new topics to many bioinformatics trainers, it is important that technical help is available. ELIXIR needs to have a streamlined process for requesting cloud resources and technical help, so that a suitable cloud is found promptly for a course and there is a clear mechanism for reimbursing the technical personnel and computing resource costs for the provider. This study is now complete, the final report and other documents will be added as they are available. |
ELIXIR Finland, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR France, ELIXIR UK, ELIXIR Belgium , ELIXIR Spain, ELIXIR Slovenia, ELIXIR Germany |
Using clouds and VMs for bioinformatics training
|
Bioinformatics analysis typically involves a large number of software and reference data, making the installation process a time-consuming task. This problem is aggravated in a course setting, where every participant needs to have an identical installation, sufficient hardware to run it, and, ideally, access to an identical set-up after the course. Ready-to-run virtual machine (VM) images containing an operating system and pre-installed analysis software, as well as containers, are gaining momentum in bioinformatics. These images and containers can be run on cloud platforms, which allows easy scaling for running tens or hundreds of simultaneous jobs in a course setting. Several ELIXIR Nodes already provide cloud resources for national use. In order to enable also other Nodes to use cloud for training, it is necessary to investigate which of these cloud providers would be willing to provide cloud resources for international use in a sustainable manner. As cloud, VMs and containers are new topics to many bioinformatics trainers, it is important that technical help is available. ELIXIR needs to have a streamlined process for requesting cloud resources and technical help, so that a suitable cloud is found promptly for a course and there is a clear mechanism for reimbursing the technical personnel and computing resource costs for the provider. This study is now complete, the final report and other documents will be added as they are available. |
ELIXIR Finland, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR France, ELIXIR UK, ELIXIR Belgium , ELIXIR Spain, ELIXIR Slovenia, ELIXIR Germany |
Using clouds and VMs for bioinformatics training
|
Bioinformatics analysis typically involves a large number of software and reference data, making the installation process a time-consuming task. This problem is aggravated in a course setting, where every participant needs to have an identical installation, sufficient hardware to run it, and, ideally, access to an identical set-up after the course. Ready-to-run virtual machine (VM) images containing an operating system and pre-installed analysis software, as well as containers, are gaining momentum in bioinformatics. These images and containers can be run on cloud platforms, which allows easy scaling for running tens or hundreds of simultaneous jobs in a course setting. Several ELIXIR Nodes already provide cloud resources for national use. In order to enable also other Nodes to use cloud for training, it is necessary to investigate which of these cloud providers would be willing to provide cloud resources for international use in a sustainable manner. As cloud, VMs and containers are new topics to many bioinformatics trainers, it is important that technical help is available. ELIXIR needs to have a streamlined process for requesting cloud resources and technical help, so that a suitable cloud is found promptly for a course and there is a clear mechanism for reimbursing the technical personnel and computing resource costs for the provider. This study is now complete, the final report and other documents will be added as they are available. |
ELIXIR Finland, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR France, ELIXIR UK, ELIXIR Belgium , ELIXIR Spain, ELIXIR Slovenia, ELIXIR Germany |
Using clouds and VMs for bioinformatics training
|
Bioinformatics analysis typically involves a large number of software and reference data, making the installation process a time-consuming task. This problem is aggravated in a course setting, where every participant needs to have an identical installation, sufficient hardware to run it, and, ideally, access to an identical set-up after the course. Ready-to-run virtual machine (VM) images containing an operating system and pre-installed analysis software, as well as containers, are gaining momentum in bioinformatics. These images and containers can be run on cloud platforms, which allows easy scaling for running tens or hundreds of simultaneous jobs in a course setting. Several ELIXIR Nodes already provide cloud resources for national use. In order to enable also other Nodes to use cloud for training, it is necessary to investigate which of these cloud providers would be willing to provide cloud resources for international use in a sustainable manner. As cloud, VMs and containers are new topics to many bioinformatics trainers, it is important that technical help is available. ELIXIR needs to have a streamlined process for requesting cloud resources and technical help, so that a suitable cloud is found promptly for a course and there is a clear mechanism for reimbursing the technical personnel and computing resource costs for the provider. This study is now complete, the final report and other documents will be added as they are available. |
ELIXIR Finland, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR France, ELIXIR UK, ELIXIR Belgium , ELIXIR Spain, ELIXIR Slovenia, ELIXIR Germany |
Using clouds and VMs for bioinformatics training
|
Bioinformatics analysis typically involves a large number of software and reference data, making the installation process a time-consuming task. This problem is aggravated in a course setting, where every participant needs to have an identical installation, sufficient hardware to run it, and, ideally, access to an identical set-up after the course. Ready-to-run virtual machine (VM) images containing an operating system and pre-installed analysis software, as well as containers, are gaining momentum in bioinformatics. These images and containers can be run on cloud platforms, which allows easy scaling for running tens or hundreds of simultaneous jobs in a course setting. Several ELIXIR Nodes already provide cloud resources for national use. In order to enable also other Nodes to use cloud for training, it is necessary to investigate which of these cloud providers would be willing to provide cloud resources for international use in a sustainable manner. As cloud, VMs and containers are new topics to many bioinformatics trainers, it is important that technical help is available. ELIXIR needs to have a streamlined process for requesting cloud resources and technical help, so that a suitable cloud is found promptly for a course and there is a clear mechanism for reimbursing the technical personnel and computing resource costs for the provider. This study is now complete, the final report and other documents will be added as they are available. |
ELIXIR Finland, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR France, ELIXIR UK, ELIXIR Belgium , ELIXIR Spain, ELIXIR Slovenia, ELIXIR Germany |
Using clouds and VMs for bioinformatics training
|
Bioinformatics analysis typically involves a large number of software and reference data, making the installation process a time-consuming task. This problem is aggravated in a course setting, where every participant needs to have an identical installation, sufficient hardware to run it, and, ideally, access to an identical set-up after the course. Ready-to-run virtual machine (VM) images containing an operating system and pre-installed analysis software, as well as containers, are gaining momentum in bioinformatics. These images and containers can be run on cloud platforms, which allows easy scaling for running tens or hundreds of simultaneous jobs in a course setting. Several ELIXIR Nodes already provide cloud resources for national use. In order to enable also other Nodes to use cloud for training, it is necessary to investigate which of these cloud providers would be willing to provide cloud resources for international use in a sustainable manner. As cloud, VMs and containers are new topics to many bioinformatics trainers, it is important that technical help is available. ELIXIR needs to have a streamlined process for requesting cloud resources and technical help, so that a suitable cloud is found promptly for a course and there is a clear mechanism for reimbursing the technical personnel and computing resource costs for the provider. This study is now complete, the final report and other documents will be added as they are available. |
ELIXIR Finland, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR France, ELIXIR UK, ELIXIR Belgium , ELIXIR Spain, ELIXIR Slovenia, ELIXIR Germany |
Using clouds and VMs for bioinformatics training
|
Bioinformatics analysis typically involves a large number of software and reference data, making the installation process a time-consuming task. This problem is aggravated in a course setting, where every participant needs to have an identical installation, sufficient hardware to run it, and, ideally, access to an identical set-up after the course. Ready-to-run virtual machine (VM) images containing an operating system and pre-installed analysis software, as well as containers, are gaining momentum in bioinformatics. These images and containers can be run on cloud platforms, which allows easy scaling for running tens or hundreds of simultaneous jobs in a course setting. Several ELIXIR Nodes already provide cloud resources for national use. In order to enable also other Nodes to use cloud for training, it is necessary to investigate which of these cloud providers would be willing to provide cloud resources for international use in a sustainable manner. As cloud, VMs and containers are new topics to many bioinformatics trainers, it is important that technical help is available. ELIXIR needs to have a streamlined process for requesting cloud resources and technical help, so that a suitable cloud is found promptly for a course and there is a clear mechanism for reimbursing the technical personnel and computing resource costs for the provider. This study is now complete, the final report and other documents will be added as they are available. |
ELIXIR Finland, ELIXIR Netherlands, ELIXIR Switzerland, ELIXIR France, ELIXIR UK, ELIXIR Belgium , ELIXIR Spain, ELIXIR Slovenia, ELIXIR Germany |